RNA–Protein interactions for RNA: ENST00000637003.1

ARID1B-222, Transcript of AT-rich interaction domain 1B, humanhuman

TSL 5 BASIC

Gene ARID1B, Length 1,290 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-222ENST00000637003 NISCHQ9Y2I1 1504 aa36.62■■■■□ 3.45
ARID1B-222ENST00000637003 CCDC180Q9P1Z9 1646 aa32.37■■■□□ 2.77
ARID1B-222ENST00000637003 ABCC9O60706 1549 aa31.92■■■□□ 2.7
ARID1B-222ENST00000637003 DCAF8L2P0C7V8 631 aa30.84■■■□□ 2.53
ARID1B-222ENST00000637003 RB1CC1Q8TDY2 1594 aa30.54■■■□□ 2.48
ARID1B-222ENST00000637003 NACADO15069 1562 aa30.5■■■□□ 2.47
ARID1B-222ENST00000637003 ZCCHC6Q5VYS8 1495 aaKnown RBP30.5■■■□□ 2.47
ARID1B-222ENST00000637003 MYO15BQ96JP2 1530 aa30.27■■■□□ 2.44
ARID1B-222ENST00000637003 DCAF1Q9Y4B6 1507 aa30.19■■■□□ 2.42
ARID1B-222ENST00000637003 PABPN1Q86U42 306 aaKnown RBP eCLIP29.94■■■□□ 2.38
ARID1B-222ENST00000637003 UNC13AQ9UPW8 1703 aa29.79■■■□□ 2.36
ARID1B-222ENST00000637003 SCRIBQ14160 1630 aa29.74■■■□□ 2.35
ARID1B-222ENST00000637003 BICRAQ9NZM4 1560 aa29.67■■■□□ 2.34
ARID1B-222ENST00000637003 DNAJC5BQ9UF47 199 aa29.36■■■□□ 2.29
ARID1B-222ENST00000637003 SHROOM4Q9ULL8 1493 aa29.21■■■□□ 2.27
ARID1B-222ENST00000637003 EIF4G1Q04637 1599 aaKnown RBP28.88■■■□□ 2.21
ARID1B-222ENST00000637003 CC2D2AQ9P2K1 1620 aa28.76■■■□□ 2.2
ARID1B-222ENST00000637003 CECR2Q9BXF3 1484 aa28.64■■■□□ 2.17
ARID1B-222ENST00000637003 SMARCA4P51532 1647 aa28.37■■■□□ 2.13
ARID1B-222ENST00000637003 BAZ1AQ9NRL2 1556 aaPredicted RBP28.33■■■□□ 2.13
ARID1B-222ENST00000637003 MROH2BQ7Z745 1585 aa28.28■■■□□ 2.12
ARID1B-222ENST00000637003 ATAD2BQ9ULI0 1458 aa28.27■■■□□ 2.12
ARID1B-222ENST00000637003 NCAPD3P42695 1498 aa28.21■■■□□ 2.11
ARID1B-222ENST00000637003 SMARCA2P51531 1590 aa28.16■■■□□ 2.1
ARID1B-222ENST00000637003 PEG3Q9GZU2 1588 aa28.03■■■□□ 2.08
ARID1B-222ENST00000637003 BAZ1BQ9UIG0 1483 aaKnown RBP28.03■■■□□ 2.08
ARID1B-222ENST00000637003 HMGXB3Q12766 1538 aa28.01■■■□□ 2.07
ARID1B-222ENST00000637003 RSF1Q96T23 1441 aaPredicted RBP27.98■■■□□ 2.07
ARID1B-222ENST00000637003 WIZO95785 1651 aa27.94■■■□□ 2.06
ARID1B-222ENST00000637003 NESP48681 1621 aa27.63■■■□□ 2.01
ARID1B-222ENST00000637003 TOP2AP11388 1531 aaKnown RBP27.61■■■□□ 2.01
ARID1B-222ENST00000637003 SUPT5HO00267 1087 aaKnown RBP27.48■■□□□ 1.99
ARID1B-222ENST00000637003 ERCC6Q03468 1493 aa27.47■■□□□ 1.99
ARID1B-222ENST00000637003 CADPSQ9ULU8 1353 aa27.45■■□□□ 1.98
ARID1B-222ENST00000637003 LAMC3Q9Y6N6 1575 aa27.39■■□□□ 1.98
ARID1B-222ENST00000637003 CCDC88BA6NC98 1476 aa27.38■■□□□ 1.97
ARID1B-222ENST00000637003 PDS5BQ9NTI5 1447 aa27.3■■□□□ 1.96
ARID1B-222ENST00000637003 CFTRP13569 1480 aa27.25■■□□□ 1.95
ARID1B-222ENST00000637003 KIF21AQ7Z4S6 1674 aa27.16■■□□□ 1.94
ARID1B-222ENST00000637003 FANCD2Q9BXW9 1451 aa27.13■■□□□ 1.93
ARID1B-222ENST00000637003 CUX2O14529 1486 aa27.06■■□□□ 1.92
ARID1B-222ENST00000637003 THOC2Q8NI27 1593 aaKnown RBP27.06■■□□□ 1.92
ARID1B-222ENST00000637003 CEP164Q9UPV0 1460 aa27.06■■□□□ 1.92
ARID1B-222ENST00000637003 MRC2Q9UBG0 1479 aa27.01■■□□□ 1.91
ARID1B-222ENST00000637003 WDR62O43379 1518 aa26.88■■□□□ 1.89
ARID1B-222ENST00000637003 URB2Q14146 1524 aaKnown RBP26.86■■□□□ 1.89
ARID1B-222ENST00000637003 PRDM2Q13029 1718 aa26.84■■□□□ 1.89
ARID1B-222ENST00000637003 TOPBP1Q92547 1522 aa26.68■■□□□ 1.86
ARID1B-222ENST00000637003 DNMBPQ6XZF7 1577 aa26.6■■□□□ 1.85
ARID1B-222ENST00000637003 ABCC8Q09428 1581 aa26.58■■□□□ 1.85
ARID1B-222ENST00000637003 CUX1P39880 1505 aa26.51■■□□□ 1.83
ARID1B-222ENST00000637003 IFT140Q96RY7 1462 aa26.49■■□□□ 1.83
ARID1B-222ENST00000637003 POLA1P09884 1462 aaPredicted RBP26.48■■□□□ 1.83
ARID1B-222ENST00000637003 ZNF608Q9ULD9 1512 aaPredicted RBP26.44■■□□□ 1.82
ARID1B-222ENST00000637003 RAD54L2Q9Y4B4 1467 aa26.44■■□□□ 1.82
ARID1B-222ENST00000637003 FGD5Q6ZNL6 1462 aa26.42■■□□□ 1.82
ARID1B-222ENST00000637003 SOGA1O94964 1423 aa26.4■■□□□ 1.82
ARID1B-222ENST00000637003 WRNQ14191 1432 aaPredicted RBP eCLIP26.37■■□□□ 1.81
ARID1B-222ENST00000637003 TARBP1Q13395 1621 aaKnown RBP26.33■■□□□ 1.81
ARID1B-222ENST00000637003 AQRO60306 1485 aaKnown RBP eCLIP26.33■■□□□ 1.81
ARID1B-222ENST00000637003 DNAJC5Q9H3Z4 198 aa26.31■■□□□ 1.8
ARID1B-222ENST00000637003 TDRD9Q8NDG6 1382 aaKnown RBP26.31■■□□□ 1.8
ARID1B-222ENST00000637003 SYNJ1O43426 1573 aa26.28■■□□□ 1.8
ARID1B-222ENST00000637003 EIF4G3O43432 1585 aaKnown RBP26.23■■□□□ 1.79
ARID1B-222ENST00000637003 TOP2BQ02880 1626 aa26.21■■□□□ 1.79
ARID1B-222ENST00000637003 BIVM-ERCC5R4GMW8 1640 aa26.17■■□□□ 1.78
ARID1B-222ENST00000637003 ABCA10Q8WWZ4 1543 aa26.12■■□□□ 1.77
ARID1B-222ENST00000637003 FBLN2P98095 1184 aa26.08■■□□□ 1.77
ARID1B-222ENST00000637003 OSCARQ8IYS5 282 aa26.07■■□□□ 1.76
ARID1B-222ENST00000637003 WDR97A6NE52 1622 aa26.06■■□□□ 1.76
ARID1B-222ENST00000637003 GAPVD1Q14C86 1478 aa26.06■■□□□ 1.76
ARID1B-222ENST00000637003 GRIN2BQ13224 1484 aa26.04■■□□□ 1.76
ARID1B-222ENST00000637003 SNAPC4Q5SXM2 1469 aa26.04■■□□□ 1.76
ARID1B-222ENST00000637003 ABCA5Q8WWZ7 1642 aa25.97■■□□□ 1.75
ARID1B-222ENST00000637003 CHMP7Q8WUX9 453 aaPredicted RBP25.95■■□□□ 1.74
ARID1B-222ENST00000637003 MAGI1Q96QZ7 1491 aaPredicted RBP25.91■■□□□ 1.74
ARID1B-222ENST00000637003 PBRM1Q86U86 1689 aa25.89■■□□□ 1.73
ARID1B-222ENST00000637003 TRIM41Q8WV44 630 aa25.87■■□□□ 1.73
ARID1B-222ENST00000637003 CHD1O14646 1710 aa25.86■■□□□ 1.73
ARID1B-222ENST00000637003 SYNJ2O15056 1496 aa25.85■■□□□ 1.73
ARID1B-222ENST00000637003 KIF27Q86VH2 1401 aa25.8■■□□□ 1.72
ARID1B-222ENST00000637003 ERICH3Q5RHP9 1530 aa25.77■■□□□ 1.72
ARID1B-222ENST00000637003 FHAD1B1AJZ9 1412 aa25.75■■□□□ 1.71
ARID1B-222ENST00000637003 ADAMTS12P58397 1594 aa25.74■■□□□ 1.71
ARID1B-222ENST00000637003 IGF1RP08069 1367 aa25.74■■□□□ 1.71
ARID1B-222ENST00000637003 GRIN2AQ12879 1464 aa25.7■■□□□ 1.7
ARID1B-222ENST00000637003 RUSC2Q8N2Y8 1516 aa25.69■■□□□ 1.7
ARID1B-222ENST00000637003 CLASP1Q7Z460 1538 aa25.62■■□□□ 1.69
ARID1B-222ENST00000637003 CHIC1Q5VXU3 224 aa25.6■■□□□ 1.69
ARID1B-222ENST00000637003 CARMIL1Q5VZK9 1371 aa25.59■■□□□ 1.69
ARID1B-222ENST00000637003 ARHGEF11O15085 1522 aa25.59■■□□□ 1.69
ARID1B-222ENST00000637003 CEP170Q5SW79 1584 aa25.57■■□□□ 1.68
ARID1B-222ENST00000637003 NUP160Q12769 1436 aa25.57■■□□□ 1.68
ARID1B-222ENST00000637003 RIMBP3CA6NJZ7 1639 aa25.56■■□□□ 1.68
ARID1B-222ENST00000637003 RIMBP3BA6NNM3 1639 aa25.56■■□□□ 1.68
ARID1B-222ENST00000637003 RIMBP3Q9UFD9 1639 aa25.56■■□□□ 1.68
ARID1B-222ENST00000637003 CYB5RLQ6IPT4 315 aa25.5■■□□□ 1.67
ARID1B-222ENST00000637003 CUL7Q14999 1698 aa25.49■■□□□ 1.67
ARID1B-222ENST00000637003 FAM9AQ8IZU1 332 aaPredicted RBP25.45■■□□□ 1.66
ARID1B-222ENST00000637003 ARAP1Q96P48 1450 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms