RNA–Protein interactions for RNA: ENST00000444975.5

TGFA-205, Transcript of transforming growth factor alpha, humanhuman

TSL 1 (best) BASIC

Gene TGFA, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-205ENST00000444975 NISCHQ9Y2I1 1504 aa39.04■■■■□ 3.84
TGFA-205ENST00000444975 CCDC180Q9P1Z9 1646 aa34.84■■■■□ 3.17
TGFA-205ENST00000444975 ABCC9O60706 1549 aa34.77■■■■□ 3.16
TGFA-205ENST00000444975 RB1CC1Q8TDY2 1594 aa33.1■■■□□ 2.89
TGFA-205ENST00000444975 NACADO15069 1562 aa32.95■■■□□ 2.86
TGFA-205ENST00000444975 DCAF8L2P0C7V8 631 aa32.86■■■□□ 2.85
TGFA-205ENST00000444975 MYO15BQ96JP2 1530 aa32.58■■■□□ 2.81
TGFA-205ENST00000444975 DNAJC5BQ9UF47 199 aa32.57■■■□□ 2.8
TGFA-205ENST00000444975 PABPN1Q86U42 306 aaKnown RBP eCLIP32.45■■■□□ 2.79
TGFA-205ENST00000444975 ZCCHC6Q5VYS8 1495 aaKnown RBP32.39■■■□□ 2.78
TGFA-205ENST00000444975 UNC13AQ9UPW8 1703 aa32.33■■■□□ 2.77
TGFA-205ENST00000444975 DCAF1Q9Y4B6 1507 aa32.25■■■□□ 2.75
TGFA-205ENST00000444975 BICRAQ9NZM4 1560 aa32.22■■■□□ 2.75
TGFA-205ENST00000444975 SCRIBQ14160 1630 aa31.81■■■□□ 2.68
TGFA-205ENST00000444975 SHROOM4Q9ULL8 1493 aa31.73■■■□□ 2.67
TGFA-205ENST00000444975 CC2D2AQ9P2K1 1620 aa31.38■■■□□ 2.61
TGFA-205ENST00000444975 EIF4G1Q04637 1599 aaKnown RBP31.37■■■□□ 2.61
TGFA-205ENST00000444975 CECR2Q9BXF3 1484 aa31.29■■■□□ 2.6
TGFA-205ENST00000444975 NCAPD3P42695 1498 aa30.48■■■□□ 2.47
TGFA-205ENST00000444975 ATAD2BQ9ULI0 1458 aa30.42■■■□□ 2.46
TGFA-205ENST00000444975 SMARCA4P51532 1647 aa30.37■■■□□ 2.45
TGFA-205ENST00000444975 SMARCA2P51531 1590 aa30.27■■■□□ 2.44
TGFA-205ENST00000444975 BAZ1AQ9NRL2 1556 aaPredicted RBP30.24■■■□□ 2.43
TGFA-205ENST00000444975 HMGXB3Q12766 1538 aa30.22■■■□□ 2.43
TGFA-205ENST00000444975 MROH2BQ7Z745 1585 aa30.1■■■□□ 2.41
TGFA-205ENST00000444975 PEG3Q9GZU2 1588 aa30.1■■■□□ 2.41
TGFA-205ENST00000444975 BAZ1BQ9UIG0 1483 aaKnown RBP30.07■■■□□ 2.4
TGFA-205ENST00000444975 NESP48681 1621 aa29.95■■■□□ 2.38
TGFA-205ENST00000444975 ERCC6Q03468 1493 aa29.94■■■□□ 2.38
TGFA-205ENST00000444975 CUX2O14529 1486 aa29.85■■■□□ 2.37
TGFA-205ENST00000444975 DNAJC5Q9H3Z4 198 aa29.71■■■□□ 2.35
TGFA-205ENST00000444975 WIZO95785 1651 aa29.69■■■□□ 2.34
TGFA-205ENST00000444975 LAMC3Q9Y6N6 1575 aa29.69■■■□□ 2.34
TGFA-205ENST00000444975 RSF1Q96T23 1441 aaPredicted RBP29.57■■■□□ 2.32
TGFA-205ENST00000444975 CADPSQ9ULU8 1353 aa29.56■■■□□ 2.32
TGFA-205ENST00000444975 THOC2Q8NI27 1593 aaKnown RBP29.54■■■□□ 2.32
TGFA-205ENST00000444975 PDS5BQ9NTI5 1447 aa29.54■■■□□ 2.32
TGFA-205ENST00000444975 KIF21AQ7Z4S6 1674 aa29.47■■■□□ 2.31
TGFA-205ENST00000444975 TOP2AP11388 1531 aaKnown RBP29.34■■■□□ 2.29
TGFA-205ENST00000444975 MRC2Q9UBG0 1479 aa29.28■■■□□ 2.28
TGFA-205ENST00000444975 CFTRP13569 1480 aa29.26■■■□□ 2.27
TGFA-205ENST00000444975 FANCD2Q9BXW9 1451 aa29.2■■■□□ 2.26
TGFA-205ENST00000444975 WDR62O43379 1518 aa29.2■■■□□ 2.26
TGFA-205ENST00000444975 CEP164Q9UPV0 1460 aa29.18■■■□□ 2.26
TGFA-205ENST00000444975 CCDC88BA6NC98 1476 aa29.05■■■□□ 2.24
TGFA-205ENST00000444975 URB2Q14146 1524 aaKnown RBP28.97■■■□□ 2.23
TGFA-205ENST00000444975 PRDM2Q13029 1718 aa28.82■■■□□ 2.2
TGFA-205ENST00000444975 TOPBP1Q92547 1522 aa28.67■■■□□ 2.18
TGFA-205ENST00000444975 IFT140Q96RY7 1462 aa28.6■■■□□ 2.17
TGFA-205ENST00000444975 ZNF608Q9ULD9 1512 aaPredicted RBP28.6■■■□□ 2.17
TGFA-205ENST00000444975 ABCC8Q09428 1581 aa28.57■■■□□ 2.16
TGFA-205ENST00000444975 OSCARQ8IYS5 282 aa28.56■■■□□ 2.16
TGFA-205ENST00000444975 DNMBPQ6XZF7 1577 aa28.54■■■□□ 2.16
TGFA-205ENST00000444975 TRIM41Q8WV44 630 aa28.43■■■□□ 2.14
TGFA-205ENST00000444975 POLA1P09884 1462 aaPredicted RBP28.4■■■□□ 2.14
TGFA-205ENST00000444975 TARBP1Q13395 1621 aaKnown RBP28.4■■■□□ 2.14
TGFA-205ENST00000444975 SUPT5HO00267 1087 aaKnown RBP28.37■■■□□ 2.13
TGFA-205ENST00000444975 EIF4G3O43432 1585 aaKnown RBP28.37■■■□□ 2.13
TGFA-205ENST00000444975 AQRO60306 1485 aaKnown RBP eCLIP28.36■■■□□ 2.13
TGFA-205ENST00000444975 RAD54L2Q9Y4B4 1467 aa28.31■■■□□ 2.12
TGFA-205ENST00000444975 SOGA1O94964 1423 aa28.27■■■□□ 2.12
TGFA-205ENST00000444975 CUX1P39880 1505 aa28.26■■■□□ 2.11
TGFA-205ENST00000444975 FGD5Q6ZNL6 1462 aa28.23■■■□□ 2.11
TGFA-205ENST00000444975 TDRD9Q8NDG6 1382 aaKnown RBP28.23■■■□□ 2.11
TGFA-205ENST00000444975 RIMBP3CA6NJZ7 1639 aa28.12■■■□□ 2.09
TGFA-205ENST00000444975 RIMBP3BA6NNM3 1639 aa28.12■■■□□ 2.09
TGFA-205ENST00000444975 RIMBP3Q9UFD9 1639 aa28.12■■■□□ 2.09
TGFA-205ENST00000444975 FBLN2P98095 1184 aa28.09■■■□□ 2.09
TGFA-205ENST00000444975 ARHGEF11O15085 1522 aa28.08■■■□□ 2.09
TGFA-205ENST00000444975 CHD1O14646 1710 aa28.08■■■□□ 2.09
TGFA-205ENST00000444975 WDR97A6NE52 1622 aa28.04■■■□□ 2.08
TGFA-205ENST00000444975 SNAPC4Q5SXM2 1469 aa28.03■■■□□ 2.08
TGFA-205ENST00000444975 GRIN2BQ13224 1484 aa27.98■■■□□ 2.07
TGFA-205ENST00000444975 MAGI1Q96QZ7 1491 aaPredicted RBP27.95■■■□□ 2.07
TGFA-205ENST00000444975 ABCA10Q8WWZ4 1543 aa27.93■■■□□ 2.06
TGFA-205ENST00000444975 CHMP7Q8WUX9 453 aaPredicted RBP27.92■■■□□ 2.06
TGFA-205ENST00000444975 GAPVD1Q14C86 1478 aa27.91■■■□□ 2.06
TGFA-205ENST00000444975 CYB5RLQ6IPT4 315 aa27.9■■■□□ 2.06
TGFA-205ENST00000444975 SYNJ2O15056 1496 aa27.87■■■□□ 2.05
TGFA-205ENST00000444975 WRNQ14191 1432 aaPredicted RBP eCLIP27.85■■■□□ 2.05
TGFA-205ENST00000444975 ARAP1Q96P48 1450 aa27.85■■■□□ 2.05
TGFA-205ENST00000444975 CLASP1Q7Z460 1538 aa27.85■■■□□ 2.05
TGFA-205ENST00000444975 ABCA5Q8WWZ7 1642 aa27.84■■■□□ 2.05
TGFA-205ENST00000444975 SYNJ1O43426 1573 aa27.82■■■□□ 2.04
TGFA-205ENST00000444975 TOP2BQ02880 1626 aa27.81■■■□□ 2.04
TGFA-205ENST00000444975 PBRM1Q86U86 1689 aa27.8■■■□□ 2.04
TGFA-205ENST00000444975 BIVM-ERCC5R4GMW8 1640 aa27.78■■■□□ 2.04
TGFA-205ENST00000444975 GRIN2AQ12879 1464 aa27.63■■■□□ 2.01
TGFA-205ENST00000444975 ADAMTS12P58397 1594 aa27.61■■■□□ 2.01
TGFA-205ENST00000444975 FHAD1B1AJZ9 1412 aa27.58■■■□□ 2
TGFA-205ENST00000444975 NUP160Q12769 1436 aa27.56■■■□□ 2
TGFA-205ENST00000444975 ERICH3Q5RHP9 1530 aa27.56■■■□□ 2
TGFA-205ENST00000444975 CEP170Q5SW79 1584 aa27.52■■■□□ 2
TGFA-205ENST00000444975 TRHP20396 242 aaPredicted RBP27.47■■□□□ 1.99
TGFA-205ENST00000444975 ERCC6L2Q5T890 1561 aa27.46■■□□□ 1.99
TGFA-205ENST00000444975 SHROOM2Q13796 1616 aa27.37■■□□□ 1.97
TGFA-205ENST00000444975 IGF1RP08069 1367 aa27.34■■□□□ 1.97
TGFA-205ENST00000444975 JPH4Q96JJ6 628 aa27.29■■□□□ 1.96
TGFA-205ENST00000444975 KIF27Q86VH2 1401 aa27.29■■□□□ 1.96
TGFA-205ENST00000444975 PRG4Q92954 1404 aaPredicted RBP27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 431.7 ms