RNA–Protein interactions for RNA: ENST00000368789.1

LCE3E-201, Transcript of late cornified envelope 3E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCE3E, Length 611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3E-201ENST00000368789 NISCHQ9Y2I1 1504 aa39.78■■■■□ 3.96
LCE3E-201ENST00000368789 CCDC180Q9P1Z9 1646 aa35.77■■■■□ 3.32
LCE3E-201ENST00000368789 ABCC9O60706 1549 aa35.64■■■■□ 3.3
LCE3E-201ENST00000368789 RB1CC1Q8TDY2 1594 aa34■■■■□ 3.03
LCE3E-201ENST00000368789 NACADO15069 1562 aa33.77■■■■□ 3
LCE3E-201ENST00000368789 DCAF8L2P0C7V8 631 aa33.42■■■□□ 2.94
LCE3E-201ENST00000368789 DNAJC5BQ9UF47 199 aa33.39■■■□□ 2.94
LCE3E-201ENST00000368789 MYO15BQ96JP2 1530 aa33.34■■■□□ 2.93
LCE3E-201ENST00000368789 UNC13AQ9UPW8 1703 aa33.27■■■□□ 2.92
LCE3E-201ENST00000368789 PABPN1Q86U42 306 aaKnown RBP eCLIP33.13■■■□□ 2.89
LCE3E-201ENST00000368789 BICRAQ9NZM4 1560 aa33.01■■■□□ 2.88
LCE3E-201ENST00000368789 ZCCHC6Q5VYS8 1495 aaKnown RBP32.99■■■□□ 2.87
LCE3E-201ENST00000368789 DCAF1Q9Y4B6 1507 aa32.92■■■□□ 2.86
LCE3E-201ENST00000368789 SHROOM4Q9ULL8 1493 aa32.62■■■□□ 2.81
LCE3E-201ENST00000368789 SCRIBQ14160 1630 aa32.51■■■□□ 2.8
LCE3E-201ENST00000368789 CC2D2AQ9P2K1 1620 aa32.25■■■□□ 2.75
LCE3E-201ENST00000368789 EIF4G1Q04637 1599 aaKnown RBP32.19■■■□□ 2.74
LCE3E-201ENST00000368789 CECR2Q9BXF3 1484 aa32.13■■■□□ 2.73
LCE3E-201ENST00000368789 NCAPD3P42695 1498 aa31.15■■■□□ 2.58
LCE3E-201ENST00000368789 SMARCA4P51532 1647 aa31.06■■■□□ 2.56
LCE3E-201ENST00000368789 ATAD2BQ9ULI0 1458 aa31.05■■■□□ 2.56
LCE3E-201ENST00000368789 SMARCA2P51531 1590 aa31■■■□□ 2.55
LCE3E-201ENST00000368789 HMGXB3Q12766 1538 aa30.97■■■□□ 2.55
LCE3E-201ENST00000368789 BAZ1AQ9NRL2 1556 aaPredicted RBP30.9■■■□□ 2.54
LCE3E-201ENST00000368789 ERCC6Q03468 1493 aa30.79■■■□□ 2.52
LCE3E-201ENST00000368789 CUX2O14529 1486 aa30.78■■■□□ 2.52
LCE3E-201ENST00000368789 PEG3Q9GZU2 1588 aa30.78■■■□□ 2.52
LCE3E-201ENST00000368789 BAZ1BQ9UIG0 1483 aaKnown RBP30.75■■■□□ 2.51
LCE3E-201ENST00000368789 DNAJC5Q9H3Z4 198 aa30.69■■■□□ 2.5
LCE3E-201ENST00000368789 MROH2BQ7Z745 1585 aa30.63■■■□□ 2.49
LCE3E-201ENST00000368789 NESP48681 1621 aa30.63■■■□□ 2.49
LCE3E-201ENST00000368789 LAMC3Q9Y6N6 1575 aa30.49■■■□□ 2.47
LCE3E-201ENST00000368789 THOC2Q8NI27 1593 aaKnown RBP30.39■■■□□ 2.46
LCE3E-201ENST00000368789 KIF21AQ7Z4S6 1674 aa30.3■■■□□ 2.44
LCE3E-201ENST00000368789 WIZO95785 1651 aa30.28■■■□□ 2.44
LCE3E-201ENST00000368789 PDS5BQ9NTI5 1447 aa30.27■■■□□ 2.44
LCE3E-201ENST00000368789 CADPSQ9ULU8 1353 aa30.18■■■□□ 2.42
LCE3E-201ENST00000368789 MRC2Q9UBG0 1479 aa30.02■■■□□ 2.4
LCE3E-201ENST00000368789 RSF1Q96T23 1441 aaPredicted RBP29.99■■■□□ 2.39
LCE3E-201ENST00000368789 WDR62O43379 1518 aa29.97■■■□□ 2.39
LCE3E-201ENST00000368789 TOP2AP11388 1531 aaKnown RBP29.92■■■□□ 2.38
LCE3E-201ENST00000368789 CEP164Q9UPV0 1460 aa29.9■■■□□ 2.38
LCE3E-201ENST00000368789 CFTRP13569 1480 aa29.87■■■□□ 2.37
LCE3E-201ENST00000368789 FANCD2Q9BXW9 1451 aa29.85■■■□□ 2.37
LCE3E-201ENST00000368789 PRDM2Q13029 1718 aa29.65■■■□□ 2.34
LCE3E-201ENST00000368789 URB2Q14146 1524 aaKnown RBP29.61■■■□□ 2.33
LCE3E-201ENST00000368789 CCDC88BA6NC98 1476 aa29.54■■■□□ 2.32
LCE3E-201ENST00000368789 IFT140Q96RY7 1462 aa29.3■■■□□ 2.28
LCE3E-201ENST00000368789 OSCARQ8IYS5 282 aa29.3■■■□□ 2.28
LCE3E-201ENST00000368789 TOPBP1Q92547 1522 aa29.3■■■□□ 2.28
LCE3E-201ENST00000368789 TRIM41Q8WV44 630 aa29.28■■■□□ 2.28
LCE3E-201ENST00000368789 ABCC8Q09428 1581 aa29.25■■■□□ 2.27
LCE3E-201ENST00000368789 ZNF608Q9ULD9 1512 aaPredicted RBP29.23■■■□□ 2.27
LCE3E-201ENST00000368789 DNMBPQ6XZF7 1577 aa29.22■■■□□ 2.27
LCE3E-201ENST00000368789 EIF4G3O43432 1585 aaKnown RBP29.12■■■□□ 2.25
LCE3E-201ENST00000368789 TARBP1Q13395 1621 aaKnown RBP29.06■■■□□ 2.24
LCE3E-201ENST00000368789 POLA1P09884 1462 aaPredicted RBP29■■■□□ 2.23
LCE3E-201ENST00000368789 RIMBP3CA6NJZ7 1639 aa28.99■■■□□ 2.23
LCE3E-201ENST00000368789 RIMBP3BA6NNM3 1639 aa28.99■■■□□ 2.23
LCE3E-201ENST00000368789 RIMBP3Q9UFD9 1639 aa28.99■■■□□ 2.23
LCE3E-201ENST00000368789 AQRO60306 1485 aaKnown RBP eCLIP28.94■■■□□ 2.22
LCE3E-201ENST00000368789 CHD1O14646 1710 aa28.91■■■□□ 2.22
LCE3E-201ENST00000368789 ARHGEF11O15085 1522 aa28.89■■■□□ 2.21
LCE3E-201ENST00000368789 RAD54L2Q9Y4B4 1467 aa28.85■■■□□ 2.21
LCE3E-201ENST00000368789 SOGA1O94964 1423 aa28.83■■■□□ 2.21
LCE3E-201ENST00000368789 WDR97A6NE52 1622 aa28.82■■■□□ 2.2
LCE3E-201ENST00000368789 FGD5Q6ZNL6 1462 aa28.81■■■□□ 2.2
LCE3E-201ENST00000368789 CUX1P39880 1505 aa28.79■■■□□ 2.2
LCE3E-201ENST00000368789 TDRD9Q8NDG6 1382 aaKnown RBP28.75■■■□□ 2.19
LCE3E-201ENST00000368789 FBLN2P98095 1184 aa28.7■■■□□ 2.18
LCE3E-201ENST00000368789 SNAPC4Q5SXM2 1469 aa28.68■■■□□ 2.18
LCE3E-201ENST00000368789 MAGI1Q96QZ7 1491 aaPredicted RBP28.64■■■□□ 2.17
LCE3E-201ENST00000368789 GRIN2BQ13224 1484 aa28.62■■■□□ 2.17
LCE3E-201ENST00000368789 ARAP1Q96P48 1450 aa28.59■■■□□ 2.17
LCE3E-201ENST00000368789 CYB5RLQ6IPT4 315 aa28.58■■■□□ 2.17
LCE3E-201ENST00000368789 CLASP1Q7Z460 1538 aa28.58■■■□□ 2.17
LCE3E-201ENST00000368789 SUPT5HO00267 1087 aaKnown RBP28.57■■■□□ 2.16
LCE3E-201ENST00000368789 SYNJ1O43426 1573 aa28.55■■■□□ 2.16
LCE3E-201ENST00000368789 PBRM1Q86U86 1689 aa28.54■■■□□ 2.16
LCE3E-201ENST00000368789 SYNJ2O15056 1496 aa28.53■■■□□ 2.16
LCE3E-201ENST00000368789 CHMP7Q8WUX9 453 aaPredicted RBP28.52■■■□□ 2.16
LCE3E-201ENST00000368789 GAPVD1Q14C86 1478 aa28.51■■■□□ 2.15
LCE3E-201ENST00000368789 ABCA10Q8WWZ4 1543 aa28.5■■■□□ 2.15
LCE3E-201ENST00000368789 ABCA5Q8WWZ7 1642 aa28.49■■■□□ 2.15
LCE3E-201ENST00000368789 BIVM-ERCC5R4GMW8 1640 aa28.38■■■□□ 2.13
LCE3E-201ENST00000368789 TOP2BQ02880 1626 aa28.36■■■□□ 2.13
LCE3E-201ENST00000368789 WRNQ14191 1432 aaPredicted RBP eCLIP28.36■■■□□ 2.13
LCE3E-201ENST00000368789 ADAMTS12P58397 1594 aa28.27■■■□□ 2.12
LCE3E-201ENST00000368789 TRHP20396 242 aaPredicted RBP28.26■■■□□ 2.11
LCE3E-201ENST00000368789 GRIN2AQ12879 1464 aa28.26■■■□□ 2.11
LCE3E-201ENST00000368789 NUP160Q12769 1436 aa28.17■■■□□ 2.1
LCE3E-201ENST00000368789 CEP170Q5SW79 1584 aa28.16■■■□□ 2.1
LCE3E-201ENST00000368789 ERICH3Q5RHP9 1530 aa28.16■■■□□ 2.1
LCE3E-201ENST00000368789 FHAD1B1AJZ9 1412 aa28.15■■■□□ 2.1
LCE3E-201ENST00000368789 ERCC6L2Q5T890 1561 aa28.08■■■□□ 2.09
LCE3E-201ENST00000368789 SHROOM2Q13796 1616 aa28.08■■■□□ 2.09
LCE3E-201ENST00000368789 RUSC2Q8N2Y8 1516 aa27.87■■■□□ 2.05
LCE3E-201ENST00000368789 PRG4Q92954 1404 aaPredicted RBP27.85■■■□□ 2.05
LCE3E-201ENST00000368789 JPH4Q96JJ6 628 aa27.81■■■□□ 2.04
LCE3E-201ENST00000368789 CUL7Q14999 1698 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms