Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
VTNP04004 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.93■□□□□ 0.14
VTNP04004 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VTNP04004 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.93■□□□□ 0.14
VTNP04004 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
VTNP04004 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
VTNP04004 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC15.93■□□□□ 0.14
VTNP04004 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC15.93■□□□□ 0.14
VTNP04004 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
VTNP04004 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.93■□□□□ 0.14
VTNP04004 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
VTNP04004 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VTNP04004 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
VTNP04004 AC026316.1-201ENST00000398900 414 ntBASIC15.93■□□□□ 0.14
VTNP04004 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC15.93■□□□□ 0.14
VTNP04004 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC15.93■□□□□ 0.14
VTNP04004 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC15.93■□□□□ 0.14
VTNP04004 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.93■□□□□ 0.14
VTNP04004 RPSAP15-201ENST00000448168 861 ntBASIC15.93■□□□□ 0.14
VTNP04004 MPRIPP1-201ENST00000452433 1089 ntBASIC15.93■□□□□ 0.14
VTNP04004 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC15.93■□□□□ 0.14
VTNP04004 RN7SL530P-201ENST00000485097 298 ntBASIC15.93■□□□□ 0.14
VTNP04004 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
VTNP04004 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
VTNP04004 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC15.93■□□□□ 0.14
VTNP04004 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC15.93■□□□□ 0.14
VTNP04004 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC15.93■□□□□ 0.14
VTNP04004 SORD2P-201ENST00000558556 1069 ntBASIC15.93■□□□□ 0.14
VTNP04004 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
VTNP04004 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
VTNP04004 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
VTNP04004 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
VTNP04004 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VTNP04004 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
VTNP04004 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
VTNP04004 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
VTNP04004 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
VTNP04004 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VTNP04004 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
VTNP04004 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VTNP04004 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
VTNP04004 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
VTNP04004 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
VTNP04004 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
VTNP04004 KRT18P9-201ENST00000604826 1300 ntBASIC15.93■□□□□ 0.14
VTNP04004 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
VTNP04004 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
VTNP04004 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VTNP04004 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VTNP04004 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VTNP04004 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
VTNP04004 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VTNP04004 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VTNP04004 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
VTNP04004 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
VTNP04004 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.92■□□□□ 0.14
VTNP04004 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VTNP04004 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC15.92■□□□□ 0.14
VTNP04004 AC092580.1-201ENST00000433998 658 ntBASIC15.92■□□□□ 0.14
VTNP04004 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC15.92■□□□□ 0.14
VTNP04004 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC15.92■□□□□ 0.14
VTNP04004 AP000358.1-201ENST00000456260 156 ntBASIC15.92■□□□□ 0.14
VTNP04004 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.92■□□□□ 0.14
VTNP04004 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC15.92■□□□□ 0.14
VTNP04004 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC15.92■□□□□ 0.14
VTNP04004 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC15.92■□□□□ 0.14
VTNP04004 MIR3147-201ENST00000577811 66 ntBASIC15.92■□□□□ 0.14
VTNP04004 MIR5572-201ENST00000583188 137 ntBASIC15.92■□□□□ 0.14
VTNP04004 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC15.92■□□□□ 0.14
VTNP04004 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
VTNP04004 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC15.92■□□□□ 0.14
VTNP04004 AC051619.9-201ENST00000623237 597 ntBASIC15.92■□□□□ 0.14
VTNP04004 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC15.92■□□□□ 0.14
VTNP04004 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
VTNP04004 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
VTNP04004 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC15.92■□□□□ 0.14
VTNP04004 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.92■□□□□ 0.14
VTNP04004 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
VTNP04004 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VTNP04004 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
VTNP04004 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VTNP04004 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.92■□□□□ 0.14
VTNP04004 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.92■□□□□ 0.14
VTNP04004 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.92■□□□□ 0.14
VTNP04004 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
VTNP04004 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VTNP04004 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
VTNP04004 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VTNP04004 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VTNP04004 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.91■□□□□ 0.14
VTNP04004 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VTNP04004 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
VTNP04004 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VTNP04004 TNRC18P2-201ENST00000417666 2714 ntBASIC15.91■□□□□ 0.14
VTNP04004 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.91■□□□□ 0.14
VTNP04004 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VTNP04004 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VTNP04004 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
VTNP04004 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.91■□□□□ 0.14
VTNP04004 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms