RNA–Protein interactions for RNA: ENST00000630317.1

PRKAB1-210, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 2 BASIC

Gene PRKAB1, Length 258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-210ENST00000630317 NISCHQ9Y2I1 1504 aa34.61■■■■□ 3.13
PRKAB1-210ENST00000630317 CCDC180Q9P1Z9 1646 aa30.78■■■□□ 2.52
PRKAB1-210ENST00000630317 ABCC9O60706 1549 aa30.15■■■□□ 2.42
PRKAB1-210ENST00000630317 RB1CC1Q8TDY2 1594 aa29.01■■■□□ 2.23
PRKAB1-210ENST00000630317 NACADO15069 1562 aa28.98■■■□□ 2.23
PRKAB1-210ENST00000630317 DCAF8L2P0C7V8 631 aa28.96■■■□□ 2.23
PRKAB1-210ENST00000630317 MYO15BQ96JP2 1530 aa28.82■■■□□ 2.2
PRKAB1-210ENST00000630317 ZCCHC6Q5VYS8 1495 aaKnown RBP28.8■■■□□ 2.2
PRKAB1-210ENST00000630317 DCAF1Q9Y4B6 1507 aa28.66■■■□□ 2.18
PRKAB1-210ENST00000630317 UNC13AQ9UPW8 1703 aa28.32■■■□□ 2.12
PRKAB1-210ENST00000630317 PABPN1Q86U42 306 aaKnown RBP eCLIP28.2■■■□□ 2.1
PRKAB1-210ENST00000630317 BICRAQ9NZM4 1560 aa28.12■■■□□ 2.09
PRKAB1-210ENST00000630317 SCRIBQ14160 1630 aa28.03■■■□□ 2.08
PRKAB1-210ENST00000630317 SHROOM4Q9ULL8 1493 aa27.86■■■□□ 2.05
PRKAB1-210ENST00000630317 DNAJC5BQ9UF47 199 aa27.79■■■□□ 2.04
PRKAB1-210ENST00000630317 EIF4G1Q04637 1599 aaKnown RBP27.38■■□□□ 1.97
PRKAB1-210ENST00000630317 CC2D2AQ9P2K1 1620 aa27.28■■□□□ 1.96
PRKAB1-210ENST00000630317 CECR2Q9BXF3 1484 aa27.12■■□□□ 1.93
PRKAB1-210ENST00000630317 SMARCA4P51532 1647 aa26.85■■□□□ 1.89
PRKAB1-210ENST00000630317 BAZ1AQ9NRL2 1556 aaPredicted RBP26.82■■□□□ 1.88
PRKAB1-210ENST00000630317 NCAPD3P42695 1498 aa26.77■■□□□ 1.88
PRKAB1-210ENST00000630317 ATAD2BQ9ULI0 1458 aa26.74■■□□□ 1.87
PRKAB1-210ENST00000630317 SMARCA2P51531 1590 aa26.71■■□□□ 1.87
PRKAB1-210ENST00000630317 MROH2BQ7Z745 1585 aa26.66■■□□□ 1.86
PRKAB1-210ENST00000630317 PEG3Q9GZU2 1588 aa26.62■■□□□ 1.85
PRKAB1-210ENST00000630317 HMGXB3Q12766 1538 aa26.59■■□□□ 1.85
PRKAB1-210ENST00000630317 BAZ1BQ9UIG0 1483 aaKnown RBP26.49■■□□□ 1.83
PRKAB1-210ENST00000630317 RSF1Q96T23 1441 aaPredicted RBP26.36■■□□□ 1.81
PRKAB1-210ENST00000630317 WIZO95785 1651 aa26.35■■□□□ 1.81
PRKAB1-210ENST00000630317 NESP48681 1621 aa26.08■■□□□ 1.77
PRKAB1-210ENST00000630317 TOP2AP11388 1531 aaKnown RBP26.08■■□□□ 1.77
PRKAB1-210ENST00000630317 LAMC3Q9Y6N6 1575 aa26.03■■□□□ 1.76
PRKAB1-210ENST00000630317 ERCC6Q03468 1493 aa26■■□□□ 1.75
PRKAB1-210ENST00000630317 CADPSQ9ULU8 1353 aa25.98■■□□□ 1.75
PRKAB1-210ENST00000630317 PDS5BQ9NTI5 1447 aa25.88■■□□□ 1.73
PRKAB1-210ENST00000630317 CCDC88BA6NC98 1476 aa25.79■■□□□ 1.72
PRKAB1-210ENST00000630317 CFTRP13569 1480 aa25.79■■□□□ 1.72
PRKAB1-210ENST00000630317 CUX2O14529 1486 aa25.78■■□□□ 1.72
PRKAB1-210ENST00000630317 KIF21AQ7Z4S6 1674 aa25.75■■□□□ 1.71
PRKAB1-210ENST00000630317 THOC2Q8NI27 1593 aaKnown RBP25.68■■□□□ 1.7
PRKAB1-210ENST00000630317 FANCD2Q9BXW9 1451 aa25.64■■□□□ 1.69
PRKAB1-210ENST00000630317 SUPT5HO00267 1087 aaKnown RBP25.63■■□□□ 1.69
PRKAB1-210ENST00000630317 CEP164Q9UPV0 1460 aa25.6■■□□□ 1.69
PRKAB1-210ENST00000630317 MRC2Q9UBG0 1479 aa25.59■■□□□ 1.69
PRKAB1-210ENST00000630317 PRDM2Q13029 1718 aa25.55■■□□□ 1.68
PRKAB1-210ENST00000630317 WDR62O43379 1518 aa25.5■■□□□ 1.67
PRKAB1-210ENST00000630317 URB2Q14146 1524 aaKnown RBP25.38■■□□□ 1.65
PRKAB1-210ENST00000630317 ABCC8Q09428 1581 aa25.27■■□□□ 1.64
PRKAB1-210ENST00000630317 TOPBP1Q92547 1522 aa25.22■■□□□ 1.63
PRKAB1-210ENST00000630317 DNMBPQ6XZF7 1577 aa25.18■■□□□ 1.62
PRKAB1-210ENST00000630317 DNAJC5Q9H3Z4 198 aa25.11■■□□□ 1.61
PRKAB1-210ENST00000630317 IFT140Q96RY7 1462 aa25.09■■□□□ 1.61
PRKAB1-210ENST00000630317 CUX1P39880 1505 aa25.01■■□□□ 1.59
PRKAB1-210ENST00000630317 POLA1P09884 1462 aaPredicted RBP25■■□□□ 1.59
PRKAB1-210ENST00000630317 ZNF608Q9ULD9 1512 aaPredicted RBP24.96■■□□□ 1.59
PRKAB1-210ENST00000630317 TARBP1Q13395 1621 aaKnown RBP24.95■■□□□ 1.58
PRKAB1-210ENST00000630317 SOGA1O94964 1423 aa24.94■■□□□ 1.58
PRKAB1-210ENST00000630317 FGD5Q6ZNL6 1462 aa24.93■■□□□ 1.58
PRKAB1-210ENST00000630317 RAD54L2Q9Y4B4 1467 aa24.89■■□□□ 1.58
PRKAB1-210ENST00000630317 WRNQ14191 1432 aaPredicted RBP eCLIP24.84■■□□□ 1.57
PRKAB1-210ENST00000630317 AQRO60306 1485 aaKnown RBP eCLIP24.83■■□□□ 1.572e-11■■■■■ 62.1
PRKAB1-210ENST00000630317 EIF4G3O43432 1585 aaKnown RBP24.83■■□□□ 1.57
PRKAB1-210ENST00000630317 TOP2BQ02880 1626 aa24.79■■□□□ 1.56
PRKAB1-210ENST00000630317 TDRD9Q8NDG6 1382 aaKnown RBP24.79■■□□□ 1.56
PRKAB1-210ENST00000630317 WDR97A6NE52 1622 aa24.77■■□□□ 1.56
PRKAB1-210ENST00000630317 BIVM-ERCC5R4GMW8 1640 aa24.77■■□□□ 1.56
PRKAB1-210ENST00000630317 OSCARQ8IYS5 282 aa24.76■■□□□ 1.55
PRKAB1-210ENST00000630317 SYNJ1O43426 1573 aa24.75■■□□□ 1.55
PRKAB1-210ENST00000630317 ABCA10Q8WWZ4 1543 aa24.71■■□□□ 1.55
PRKAB1-210ENST00000630317 GRIN2BQ13224 1484 aa24.64■■□□□ 1.53
PRKAB1-210ENST00000630317 GAPVD1Q14C86 1478 aa24.64■■□□□ 1.53
PRKAB1-210ENST00000630317 ABCA5Q8WWZ7 1642 aa24.58■■□□□ 1.53
PRKAB1-210ENST00000630317 SNAPC4Q5SXM2 1469 aa24.58■■□□□ 1.52
PRKAB1-210ENST00000630317 MAGI1Q96QZ7 1491 aaPredicted RBP24.58■■□□□ 1.52
PRKAB1-210ENST00000630317 FBLN2P98095 1184 aa24.55■■□□□ 1.52
PRKAB1-210ENST00000630317 CHD1O14646 1710 aa24.54■■□□□ 1.52
PRKAB1-210ENST00000630317 PBRM1Q86U86 1689 aa24.53■■□□□ 1.52
PRKAB1-210ENST00000630317 CHMP7Q8WUX9 453 aaPredicted RBP24.51■■□□□ 1.51
PRKAB1-210ENST00000630317 SYNJ2O15056 1496 aa24.48■■□□□ 1.51
PRKAB1-210ENST00000630317 ERICH3Q5RHP9 1530 aa24.41■■□□□ 1.5
PRKAB1-210ENST00000630317 FHAD1B1AJZ9 1412 aa24.35■■□□□ 1.49
PRKAB1-210ENST00000630317 KIF27Q86VH2 1401 aa24.35■■□□□ 1.49
PRKAB1-210ENST00000630317 ADAMTS12P58397 1594 aa24.34■■□□□ 1.49
PRKAB1-210ENST00000630317 GRIN2AQ12879 1464 aa24.31■■□□□ 1.48
PRKAB1-210ENST00000630317 CLASP1Q7Z460 1538 aa24.3■■□□□ 1.48
PRKAB1-210ENST00000630317 RIMBP3CA6NJZ7 1639 aa24.28■■□□□ 1.48
PRKAB1-210ENST00000630317 RIMBP3BA6NNM3 1639 aa24.28■■□□□ 1.48
PRKAB1-210ENST00000630317 IGF1RP08069 1367 aa24.28■■□□□ 1.48
PRKAB1-210ENST00000630317 RIMBP3Q9UFD9 1639 aa24.28■■□□□ 1.48
PRKAB1-210ENST00000630317 ARHGEF11O15085 1522 aa24.27■■□□□ 1.48
PRKAB1-210ENST00000630317 TRIM41Q8WV44 630 aa24.25■■□□□ 1.47
PRKAB1-210ENST00000630317 NUP160Q12769 1436 aa24.22■■□□□ 1.47
PRKAB1-210ENST00000630317 CEP170Q5SW79 1584 aa24.16■■□□□ 1.46
PRKAB1-210ENST00000630317 CUL7Q14999 1698 aa24.16■■□□□ 1.46
PRKAB1-210ENST00000630317 CARMIL1Q5VZK9 1371 aa24.13■■□□□ 1.45
PRKAB1-210ENST00000630317 CYB5RLQ6IPT4 315 aa24.1■■□□□ 1.45
PRKAB1-210ENST00000630317 RUSC2Q8N2Y8 1516 aa24.08■■□□□ 1.45
PRKAB1-210ENST00000630317 ARAP1Q96P48 1450 aa24.07■■□□□ 1.44
PRKAB1-210ENST00000630317 SHROOM2Q13796 1616 aa24.02■■□□□ 1.44
PRKAB1-210ENST00000630317 JPH4Q96JJ6 628 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms