Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC006453.4-201ENST00000636949 1252 ntBASIC11.81□□□□□ -0.52
SRRM4A7MD48 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SRRM4A7MD48 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SRRM4A7MD48 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SRRM4A7MD48 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SRRM4A7MD48 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC11.81□□□□□ -0.52
SRRM4A7MD48 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC11.81□□□□□ -0.52
SRRM4A7MD48 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC11.81□□□□□ -0.52
SRRM4A7MD48 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SRRM4A7MD48 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC11.81□□□□□ -0.52
SRRM4A7MD48 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC11.81□□□□□ -0.52
SRRM4A7MD48 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SRRM4A7MD48 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
SRRM4A7MD48 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SRRM4A7MD48 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SRRM4A7MD48 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SRRM4A7MD48 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
SRRM4A7MD48 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC11.81□□□□□ -0.52
SRRM4A7MD48 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SRRM4A7MD48 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SRRM4A7MD48 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SRRM4A7MD48 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
SRRM4A7MD48 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC11.81□□□□□ -0.52
SRRM4A7MD48 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
SRRM4A7MD48 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SRRM4A7MD48 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC11.8□□□□□ -0.52
SRRM4A7MD48 KRT8P28-201ENST00000433288 1390 ntBASIC11.8□□□□□ -0.52
SRRM4A7MD48 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SRRM4A7MD48 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
SRRM4A7MD48 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SRRM4A7MD48 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC11.8□□□□□ -0.52
SRRM4A7MD48 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SRRM4A7MD48 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
SRRM4A7MD48 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC11.8□□□□□ -0.52
SRRM4A7MD48 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SRRM4A7MD48 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SRRM4A7MD48 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
SRRM4A7MD48 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
SRRM4A7MD48 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC11.8□□□□□ -0.52
SRRM4A7MD48 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC11.8□□□□□ -0.52
SRRM4A7MD48 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SRRM4A7MD48 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
SRRM4A7MD48 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SRRM4A7MD48 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
SRRM4A7MD48 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SRRM4A7MD48 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SRRM4A7MD48 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC11.8□□□□□ -0.52
SRRM4A7MD48 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SRRM4A7MD48 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
SRRM4A7MD48 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SRRM4A7MD48 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SRRM4A7MD48 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SRRM4A7MD48 CNN2P8-201ENST00000421872 913 ntBASIC11.8□□□□□ -0.52
SRRM4A7MD48 AC007551.1-201ENST00000457394 519 ntBASIC11.8□□□□□ -0.52
SRRM4A7MD48 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC11.8□□□□□ -0.52
SRRM4A7MD48 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
SRRM4A7MD48 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC11.8□□□□□ -0.52
SRRM4A7MD48 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
SRRM4A7MD48 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC11.8□□□□□ -0.52
SRRM4A7MD48 IGHV3-72-202ENST00000621503 303 ntBASIC11.8□□□□□ -0.52
SRRM4A7MD48 AC002472.3-201ENST00000640124 621 ntBASIC11.8□□□□□ -0.52
SRRM4A7MD48 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC11.8□□□□□ -0.52
SRRM4A7MD48 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
SRRM4A7MD48 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SRRM4A7MD48 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SRRM4A7MD48 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SRRM4A7MD48 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SRRM4A7MD48 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC11.8□□□□□ -0.52
SRRM4A7MD48 AC089987.1-201ENST00000551654 2209 ntBASIC11.8□□□□□ -0.52
SRRM4A7MD48 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SRRM4A7MD48 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SRRM4A7MD48 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SRRM4A7MD48 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SRRM4A7MD48 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SRRM4A7MD48 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SRRM4A7MD48 FUK-202ENST00000378912 3925 ntTSL 2 BASIC11.8□□□□□ -0.52
SRRM4A7MD48 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC11.8□□□□□ -0.52
SRRM4A7MD48 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SRRM4A7MD48 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SRRM4A7MD48 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SRRM4A7MD48 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SRRM4A7MD48 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
SRRM4A7MD48 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SRRM4A7MD48 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC11.8□□□□□ -0.52
SRRM4A7MD48 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SRRM4A7MD48 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SRRM4A7MD48 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
SRRM4A7MD48 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC11.8□□□□□ -0.52
SRRM4A7MD48 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SRRM4A7MD48 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SRRM4A7MD48 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
SRRM4A7MD48 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC11.79□□□□□ -0.52
SRRM4A7MD48 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SRRM4A7MD48 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
SRRM4A7MD48 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SRRM4A7MD48 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SRRM4A7MD48 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SRRM4A7MD48 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SRRM4A7MD48 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
SRRM4A7MD48 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms