Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC17.39■□□□□ 0.37
MBD4O95243 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MBD4O95243 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MBD4O95243 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC17.39■□□□□ 0.37
MBD4O95243 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
MBD4O95243 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC17.39■□□□□ 0.37
MBD4O95243 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MBD4O95243 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.39■□□□□ 0.37
MBD4O95243 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
MBD4O95243 RN7SL832P-201ENST00000607781 1756 ntBASIC17.39■□□□□ 0.37
MBD4O95243 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC17.39■□□□□ 0.37
MBD4O95243 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
MBD4O95243 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MBD4O95243 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC17.39■□□□□ 0.37
MBD4O95243 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.39■□□□□ 0.37
MBD4O95243 AL161932.2-201ENST00000435436 679 ntBASIC17.39■□□□□ 0.37
MBD4O95243 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC17.39■□□□□ 0.37
MBD4O95243 AC090857.1-201ENST00000527400 390 ntBASIC17.39■□□□□ 0.37
MBD4O95243 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC17.39■□□□□ 0.37
MBD4O95243 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
MBD4O95243 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MBD4O95243 AHCYP4-201ENST00000419201 1315 ntBASIC17.39■□□□□ 0.37
MBD4O95243 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MBD4O95243 MYO15B-237ENST00000642007 4893 ntBASIC17.39■□□□□ 0.37
MBD4O95243 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
MBD4O95243 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
MBD4O95243 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MBD4O95243 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC17.39■□□□□ 0.37
MBD4O95243 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
MBD4O95243 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
MBD4O95243 AC015802.1-201ENST00000588104 1449 ntBASIC17.38■□□□□ 0.37
MBD4O95243 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
MBD4O95243 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC17.38■□□□□ 0.37
MBD4O95243 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
MBD4O95243 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD4O95243 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD4O95243 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
MBD4O95243 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD4O95243 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD4O95243 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD4O95243 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC17.38■□□□□ 0.37
MBD4O95243 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MBD4O95243 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MBD4O95243 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.38■□□□□ 0.37
MBD4O95243 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC17.38■□□□□ 0.37
MBD4O95243 Z97180.1-201ENST00000445173 988 ntBASIC17.38■□□□□ 0.37
MBD4O95243 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC17.38■□□□□ 0.37
MBD4O95243 CCNC-217ENST00000523985 958 ntTSL 2 BASIC17.38■□□□□ 0.37
MBD4O95243 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17.38■□□□□ 0.37
MBD4O95243 MIR3619-201ENST00000579667 83 ntBASIC17.38■□□□□ 0.37
MBD4O95243 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
MBD4O95243 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC17.38■□□□□ 0.37
MBD4O95243 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC17.38■□□□□ 0.37
MBD4O95243 MIR6074-201ENST00000612054 107 ntBASIC17.38■□□□□ 0.37
MBD4O95243 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
MBD4O95243 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD4O95243 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC17.38■□□□□ 0.37
MBD4O95243 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MBD4O95243 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MBD4O95243 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD4O95243 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MBD4O95243 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC17.38■□□□□ 0.37
MBD4O95243 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17.38■□□□□ 0.37
MBD4O95243 AC139749.1-202ENST00000617529 3139 ntBASIC17.38■□□□□ 0.37
MBD4O95243 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
MBD4O95243 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MBD4O95243 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC17.38■□□□□ 0.37
MBD4O95243 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MBD4O95243 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
MBD4O95243 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MBD4O95243 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC17.37■□□□□ 0.37
MBD4O95243 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MBD4O95243 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC17.37■□□□□ 0.37
MBD4O95243 AL161772.1-201ENST00000610494 4412 ntBASIC17.37■□□□□ 0.37
MBD4O95243 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.37■□□□□ 0.37
MBD4O95243 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.37■□□□□ 0.37
MBD4O95243 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MBD4O95243 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC17.37■□□□□ 0.37
MBD4O95243 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MBD4O95243 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC17.37■□□□□ 0.37
MBD4O95243 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
MBD4O95243 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MBD4O95243 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MBD4O95243 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MBD4O95243 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MBD4O95243 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
MBD4O95243 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MBD4O95243 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC17.37■□□□□ 0.37
MBD4O95243 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
MBD4O95243 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.37■□□□□ 0.37
MBD4O95243 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC17.37■□□□□ 0.37
MBD4O95243 AC012618.1-201ENST00000461223 412 ntBASIC17.37■□□□□ 0.37
MBD4O95243 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.37■□□□□ 0.37
MBD4O95243 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MBD4O95243 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.37■□□□□ 0.37
MBD4O95243 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
MBD4O95243 CHMP4BP1-201ENST00000556017 588 ntBASIC17.37■□□□□ 0.37
MBD4O95243 RN7SL574P-201ENST00000581512 297 ntBASIC17.37■□□□□ 0.37
MBD4O95243 DRG2-220ENST00000583355 891 ntTSL 3 BASIC17.37■□□□□ 0.37
MBD4O95243 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms