Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HMGA2P52926 DFFBP1-201ENST00000433250 979 ntBASIC13.37□□□□□ -0.27
HMGA2P52926 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.37□□□□□ -0.27
HMGA2P52926 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.37□□□□□ -0.27
HMGA2P52926 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.37□□□□□ -0.27
HMGA2P52926 RN7SL48P-201ENST00000579283 293 ntBASIC13.37□□□□□ -0.27
HMGA2P52926 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.37□□□□□ -0.27
HMGA2P52926 ENPP7P14-201ENST00000621765 1040 ntBASIC13.37□□□□□ -0.27
HMGA2P52926 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.37□□□□□ -0.27
HMGA2P52926 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.37□□□□□ -0.27
HMGA2P52926 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
HMGA2P52926 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
HMGA2P52926 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
HMGA2P52926 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HMGA2P52926 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HMGA2P52926 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HMGA2P52926 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HMGA2P52926 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HMGA2P52926 AL356585.2-201ENST00000625078 2396 ntBASIC13.37□□□□□ -0.27
HMGA2P52926 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HMGA2P52926 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.37□□□□□ -0.27
HMGA2P52926 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HMGA2P52926 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
HMGA2P52926 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.37□□□□□ -0.27
HMGA2P52926 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HMGA2P52926 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HMGA2P52926 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
HMGA2P52926 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.37□□□□□ -0.27
HMGA2P52926 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
HMGA2P52926 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.36□□□□□ -0.27
HMGA2P52926 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HMGA2P52926 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HMGA2P52926 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HMGA2P52926 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
HMGA2P52926 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HMGA2P52926 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HMGA2P52926 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
HMGA2P52926 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HMGA2P52926 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
HMGA2P52926 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HMGA2P52926 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HMGA2P52926 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HMGA2P52926 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HMGA2P52926 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HMGA2P52926 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HMGA2P52926 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
HMGA2P52926 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HMGA2P52926 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.36□□□□□ -0.27
HMGA2P52926 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
HMGA2P52926 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HMGA2P52926 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HMGA2P52926 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HMGA2P52926 BASP1P1-201ENST00000430708 665 ntBASIC13.36□□□□□ -0.27
HMGA2P52926 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.36□□□□□ -0.27
HMGA2P52926 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.36□□□□□ -0.27
HMGA2P52926 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.36□□□□□ -0.27
HMGA2P52926 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HMGA2P52926 AC011495.1-201ENST00000498085 584 ntBASIC13.36□□□□□ -0.27
HMGA2P52926 AL391280.1-201ENST00000506969 1062 ntBASIC13.36□□□□□ -0.27
HMGA2P52926 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.36□□□□□ -0.27
HMGA2P52926 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
HMGA2P52926 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HMGA2P52926 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HMGA2P52926 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
HMGA2P52926 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HMGA2P52926 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HMGA2P52926 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
HMGA2P52926 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HMGA2P52926 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.36□□□□□ -0.27
HMGA2P52926 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HMGA2P52926 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.36□□□□□ -0.27
HMGA2P52926 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.36□□□□□ -0.27
HMGA2P52926 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
HMGA2P52926 KRT18P28-201ENST00000453838 1332 ntBASIC13.36□□□□□ -0.27
HMGA2P52926 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
HMGA2P52926 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HMGA2P52926 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
HMGA2P52926 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
HMGA2P52926 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.36□□□□□ -0.27
HMGA2P52926 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HMGA2P52926 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HMGA2P52926 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.35□□□□□ -0.27
HMGA2P52926 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HMGA2P52926 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
HMGA2P52926 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HMGA2P52926 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.35□□□□□ -0.27
HMGA2P52926 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HMGA2P52926 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HMGA2P52926 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HMGA2P52926 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HMGA2P52926 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HMGA2P52926 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
HMGA2P52926 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HMGA2P52926 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HMGA2P52926 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HMGA2P52926 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HMGA2P52926 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.35□□□□□ -0.27
HMGA2P52926 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HMGA2P52926 MIR1233-2-201ENST00000408138 82 ntBASIC13.35□□□□□ -0.27
HMGA2P52926 MIR1233-1-201ENST00000408722 82 ntBASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms