Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 AC005077.2-201ENST00000449786 690 ntBASIC13.1□□□□□ -0.31
RNF138Q8WVD3 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 TSACC-208ENST00000481479 741 ntTSL 2 BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 AC026748.1-201ENST00000624349 3251 ntBASIC13.1□□□□□ -0.31
RNF138Q8WVD3 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF138Q8WVD3 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 PDIA3P2-201ENST00000428073 158 ntBASIC13.09□□□□□ -0.31
RNF138Q8WVD3 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 AC006335.1-201ENST00000445200 547 ntBASIC13.09□□□□□ -0.31
RNF138Q8WVD3 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 AP002414.2-201ENST00000591780 3365 ntBASIC13.09□□□□□ -0.31
RNF138Q8WVD3 BAP1-211ENST00000615113 489 ntBASIC13.09□□□□□ -0.31
RNF138Q8WVD3 AC091544.8-201ENST00000619490 361 ntBASIC13.09□□□□□ -0.31
RNF138Q8WVD3 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
RNF138Q8WVD3 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
RNF138Q8WVD3 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC13.08□□□□□ -0.31
RNF138Q8WVD3 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
RNF138Q8WVD3 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.08□□□□□ -0.31
RNF138Q8WVD3 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.08□□□□□ -0.31
RNF138Q8WVD3 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.31
RNF138Q8WVD3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
RNF138Q8WVD3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
RNF138Q8WVD3 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.08□□□□□ -0.32
RNF138Q8WVD3 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms