Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SEC61A1P61619 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
SEC61A1P61619 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SEC61A1P61619 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SEC61A1P61619 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.98□□□□□ -0.33
SEC61A1P61619 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.98□□□□□ -0.33
SEC61A1P61619 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.98□□□□□ -0.33
SEC61A1P61619 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SEC61A1P61619 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SEC61A1P61619 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.98□□□□□ -0.33
SEC61A1P61619 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.98□□□□□ -0.33
SEC61A1P61619 INTS4P2-202ENST00000614726 2019 ntBASIC12.98□□□□□ -0.33
SEC61A1P61619 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SEC61A1P61619 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
SEC61A1P61619 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SEC61A1P61619 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SEC61A1P61619 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.98□□□□□ -0.33
SEC61A1P61619 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SEC61A1P61619 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.97□□□□□ -0.33
SEC61A1P61619 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SEC61A1P61619 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SEC61A1P61619 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
SEC61A1P61619 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.97□□□□□ -0.33
SEC61A1P61619 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SEC61A1P61619 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SEC61A1P61619 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SEC61A1P61619 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.97□□□□□ -0.33
SEC61A1P61619 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC12.97□□□□□ -0.33
SEC61A1P61619 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SEC61A1P61619 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.97□□□□□ -0.33
SEC61A1P61619 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SEC61A1P61619 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SEC61A1P61619 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SEC61A1P61619 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SEC61A1P61619 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SEC61A1P61619 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.97□□□□□ -0.33
SEC61A1P61619 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
SEC61A1P61619 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SEC61A1P61619 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SEC61A1P61619 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.97□□□□□ -0.33
SEC61A1P61619 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SEC61A1P61619 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SEC61A1P61619 OR8S1-201ENST00000310194 1080 ntBASIC12.97□□□□□ -0.33
SEC61A1P61619 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
SEC61A1P61619 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SEC61A1P61619 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
SEC61A1P61619 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SEC61A1P61619 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.97□□□□□ -0.33
SEC61A1P61619 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.97□□□□□ -0.33
SEC61A1P61619 GHSR-202ENST00000427970 912 ntBASIC12.97□□□□□ -0.33
SEC61A1P61619 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SEC61A1P61619 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.97□□□□□ -0.33
SEC61A1P61619 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.97□□□□□ -0.33
SEC61A1P61619 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.97□□□□□ -0.33
SEC61A1P61619 HILS1-202ENST00000545329 423 ntBASIC12.97□□□□□ -0.33
SEC61A1P61619 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.97□□□□□ -0.33
SEC61A1P61619 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC12.97□□□□□ -0.33
SEC61A1P61619 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.97□□□□□ -0.33
SEC61A1P61619 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SEC61A1P61619 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SEC61A1P61619 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SEC61A1P61619 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SEC61A1P61619 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
SEC61A1P61619 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SEC61A1P61619 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SEC61A1P61619 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SEC61A1P61619 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.97□□□□□ -0.33
SEC61A1P61619 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SEC61A1P61619 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
SEC61A1P61619 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.97□□□□□ -0.33
SEC61A1P61619 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.97□□□□□ -0.33
SEC61A1P61619 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.97□□□□□ -0.33
SEC61A1P61619 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.97□□□□□ -0.33
SEC61A1P61619 AC018529.2-202ENST00000611482 3087 ntBASIC12.97□□□□□ -0.33
SEC61A1P61619 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.97□□□□□ -0.33
SEC61A1P61619 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.97□□□□□ -0.33
SEC61A1P61619 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
SEC61A1P61619 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.97□□□□□ -0.33
SEC61A1P61619 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SEC61A1P61619 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
SEC61A1P61619 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SEC61A1P61619 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SEC61A1P61619 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SEC61A1P61619 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
SEC61A1P61619 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SEC61A1P61619 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
SEC61A1P61619 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SEC61A1P61619 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.96□□□□□ -0.33
SEC61A1P61619 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SEC61A1P61619 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
SEC61A1P61619 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SEC61A1P61619 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
SEC61A1P61619 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.96□□□□□ -0.33
SEC61A1P61619 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
SEC61A1P61619 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SEC61A1P61619 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.96□□□□□ -0.33
SEC61A1P61619 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SEC61A1P61619 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SEC61A1P61619 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.33
SEC61A1P61619 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms