Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC12.71□□□□□ -0.38
HCFC1P51610 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC12.71□□□□□ -0.38
HCFC1P51610 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HCFC1P51610 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.71□□□□□ -0.38
HCFC1P51610 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
HCFC1P51610 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HCFC1P51610 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
HCFC1P51610 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HCFC1P51610 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HCFC1P51610 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
HCFC1P51610 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
HCFC1P51610 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
HCFC1P51610 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC12.71□□□□□ -0.38
HCFC1P51610 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC12.71□□□□□ -0.38
HCFC1P51610 LYPLA2P1-203ENST00000447689 696 ntBASIC12.71□□□□□ -0.38
HCFC1P51610 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
HCFC1P51610 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC12.71□□□□□ -0.38
HCFC1P51610 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC12.71□□□□□ -0.38
HCFC1P51610 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
HCFC1P51610 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
HCFC1P51610 NUDT4P2-201ENST00000578341 546 ntBASIC12.71□□□□□ -0.38
HCFC1P51610 RN7SL665P-201ENST00000578793 300 ntBASIC12.71□□□□□ -0.38
HCFC1P51610 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HCFC1P51610 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.71□□□□□ -0.38
HCFC1P51610 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
HCFC1P51610 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
HCFC1P51610 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.7□□□□□ -0.38
HCFC1P51610 ING5-213ENST00000636051 4199 ntTSL 5 BASIC12.7□□□□□ -0.38
HCFC1P51610 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.7□□□□□ -0.38
HCFC1P51610 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.7□□□□□ -0.38
HCFC1P51610 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.7□□□□□ -0.38
HCFC1P51610 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
HCFC1P51610 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
HCFC1P51610 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
HCFC1P51610 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.7□□□□□ -0.38
HCFC1P51610 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
HCFC1P51610 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC12.7□□□□□ -0.38
HCFC1P51610 HLA-DMA-203ENST00000395305 777 ntBASIC12.7□□□□□ -0.38
HCFC1P51610 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.7□□□□□ -0.38
HCFC1P51610 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 AC138466.5-201ENST00000624002 808 ntBASIC12.7□□□□□ -0.38
HCFC1P51610 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
HCFC1P51610 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC12.7□□□□□ -0.38
HCFC1P51610 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
HCFC1P51610 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC12.7□□□□□ -0.38
HCFC1P51610 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC12.7□□□□□ -0.38
HCFC1P51610 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.7□□□□□ -0.38
HCFC1P51610 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
HCFC1P51610 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.7□□□□□ -0.38
HCFC1P51610 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.7□□□□□ -0.38
HCFC1P51610 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.7□□□□□ -0.38
HCFC1P51610 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HCFC1P51610 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HCFC1P51610 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
HCFC1P51610 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HCFC1P51610 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HCFC1P51610 CICP23-201ENST00000605013 2741 ntBASIC12.69□□□□□ -0.38
HCFC1P51610 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HCFC1P51610 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HCFC1P51610 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms