Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBE2NP61088 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.99■□□□□ 0.79
UBE2NP61088 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.99■□□□□ 0.79
UBE2NP61088 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.99■□□□□ 0.79
UBE2NP61088 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBE2NP61088 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBE2NP61088 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBE2NP61088 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBE2NP61088 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.98■□□□□ 0.79
UBE2NP61088 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.98■□□□□ 0.79
UBE2NP61088 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBE2NP61088 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.98■□□□□ 0.79
UBE2NP61088 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.98■□□□□ 0.79
UBE2NP61088 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
UBE2NP61088 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
UBE2NP61088 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
UBE2NP61088 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
UBE2NP61088 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBE2NP61088 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBE2NP61088 LINC00543-201ENST00000567234 1845 ntBASIC19.97■□□□□ 0.79
UBE2NP61088 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
UBE2NP61088 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.97■□□□□ 0.79
UBE2NP61088 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBE2NP61088 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBE2NP61088 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBE2NP61088 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
UBE2NP61088 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBE2NP61088 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBE2NP61088 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UBE2NP61088 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UBE2NP61088 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.96■□□□□ 0.79
UBE2NP61088 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.96■□□□□ 0.79
UBE2NP61088 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.96■□□□□ 0.79
UBE2NP61088 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBE2NP61088 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBE2NP61088 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBE2NP61088 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UBE2NP61088 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UBE2NP61088 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE2NP61088 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UBE2NP61088 ALDH1A3-203ENST00000557963 1670 ntBASIC19.95■□□□□ 0.78
UBE2NP61088 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE2NP61088 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.95■□□□□ 0.78
UBE2NP61088 AL117332.1-201ENST00000622628 974 ntBASIC19.95■□□□□ 0.78
UBE2NP61088 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBE2NP61088 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.94■□□□□ 0.78
UBE2NP61088 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBE2NP61088 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBE2NP61088 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.94■□□□□ 0.78
UBE2NP61088 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.94■□□□□ 0.78
UBE2NP61088 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.94■□□□□ 0.78
UBE2NP61088 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
UBE2NP61088 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBE2NP61088 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBE2NP61088 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBE2NP61088 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.94■□□□□ 0.78
UBE2NP61088 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBE2NP61088 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBE2NP61088 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBE2NP61088 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
UBE2NP61088 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBE2NP61088 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
UBE2NP61088 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.93■□□□□ 0.78
UBE2NP61088 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
UBE2NP61088 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.93■□□□□ 0.78
UBE2NP61088 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBE2NP61088 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
UBE2NP61088 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.93■□□□□ 0.78
UBE2NP61088 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBE2NP61088 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBE2NP61088 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBE2NP61088 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.92■□□□□ 0.78
UBE2NP61088 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
UBE2NP61088 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.92■□□□□ 0.78
UBE2NP61088 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
UBE2NP61088 MIR3621-201ENST00000580529 85 ntBASIC19.92■□□□□ 0.78
UBE2NP61088 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
UBE2NP61088 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBE2NP61088 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
UBE2NP61088 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.91■□□□□ 0.78
UBE2NP61088 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBE2NP61088 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.91■□□□□ 0.78
UBE2NP61088 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.91■□□□□ 0.78
UBE2NP61088 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.91■□□□□ 0.78
UBE2NP61088 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
UBE2NP61088 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBE2NP61088 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBE2NP61088 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.9■□□□□ 0.78
UBE2NP61088 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2NP61088 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2NP61088 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.9■□□□□ 0.78
UBE2NP61088 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
UBE2NP61088 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.9■□□□□ 0.78
UBE2NP61088 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2NP61088 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2NP61088 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2NP61088 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2NP61088 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.9■□□□□ 0.78
UBE2NP61088 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
UBE2NP61088 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms