Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
UBL3O95164 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBL3O95164 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBL3O95164 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBL3O95164 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBL3O95164 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBL3O95164 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBL3O95164 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBL3O95164 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBL3O95164 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBL3O95164 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBL3O95164 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
UBL3O95164 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.34■□□□□ 0.85
UBL3O95164 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBL3O95164 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
UBL3O95164 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
UBL3O95164 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBL3O95164 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
UBL3O95164 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
UBL3O95164 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
UBL3O95164 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBL3O95164 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBL3O95164 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.33■□□□□ 0.85
UBL3O95164 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.33■□□□□ 0.84
UBL3O95164 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.32■□□□□ 0.84
UBL3O95164 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBL3O95164 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.32■□□□□ 0.84
UBL3O95164 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.32■□□□□ 0.84
UBL3O95164 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBL3O95164 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UBL3O95164 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UBL3O95164 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBL3O95164 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
UBL3O95164 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.31■□□□□ 0.84
UBL3O95164 AL117328.2-201ENST00000624617 1940 ntBASIC20.31■□□□□ 0.84
UBL3O95164 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBL3O95164 C9orf163-202ENST00000624034 2573 ntBASIC20.31■□□□□ 0.84
UBL3O95164 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBL3O95164 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.31■□□□□ 0.84
UBL3O95164 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBL3O95164 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
UBL3O95164 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
UBL3O95164 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBL3O95164 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
UBL3O95164 ABCB10P4-201ENST00000566803 2184 ntBASIC20.3■□□□□ 0.84
UBL3O95164 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.3■□□□□ 0.84
UBL3O95164 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBL3O95164 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBL3O95164 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBL3O95164 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBL3O95164 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBL3O95164 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.29■□□□□ 0.84
UBL3O95164 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.29■□□□□ 0.84
UBL3O95164 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.29■□□□□ 0.84
UBL3O95164 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBL3O95164 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
UBL3O95164 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
UBL3O95164 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
UBL3O95164 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
UBL3O95164 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBL3O95164 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
UBL3O95164 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
UBL3O95164 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBL3O95164 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.27■□□□□ 0.84
UBL3O95164 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UBL3O95164 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBL3O95164 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBL3O95164 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBL3O95164 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.27■□□□□ 0.84
UBL3O95164 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.27■□□□□ 0.84
UBL3O95164 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
UBL3O95164 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBL3O95164 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBL3O95164 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBL3O95164 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UBL3O95164 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBL3O95164 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
UBL3O95164 BX664725.1-201ENST00000438252 379 ntBASIC20.26■□□□□ 0.83
UBL3O95164 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.26■□□□□ 0.83
UBL3O95164 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
UBL3O95164 AL451085.2-201ENST00000605085 799 ntBASIC20.26■□□□□ 0.83
UBL3O95164 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UBL3O95164 AC137630.3-201ENST00000607245 391 ntBASIC20.26■□□□□ 0.83
UBL3O95164 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.26■□□□□ 0.83
UBL3O95164 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.26■□□□□ 0.83
UBL3O95164 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
UBL3O95164 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBL3O95164 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UBL3O95164 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.25■□□□□ 0.83
UBL3O95164 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UBL3O95164 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.25■□□□□ 0.83
UBL3O95164 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.25■□□□□ 0.83
UBL3O95164 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.25■□□□□ 0.83
UBL3O95164 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.25■□□□□ 0.83
UBL3O95164 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.25■□□□□ 0.83
UBL3O95164 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
UBL3O95164 HLA-L-211ENST00000482052 1765 ntBASIC20.25■□□□□ 0.83
UBL3O95164 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.25■□□□□ 0.83
UBL3O95164 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBL3O95164 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms