Protein–RNA interactions for Protein: O75954

TSPAN9, Tetraspanin-9, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9O75954 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TSPAN9O75954 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TSPAN9O75954 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.36■□□□□ 0.69
TSPAN9O75954 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.36■□□□□ 0.69
TSPAN9O75954 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.36■□□□□ 0.69
TSPAN9O75954 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.36■□□□□ 0.69
TSPAN9O75954 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.36■□□□□ 0.69
TSPAN9O75954 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TSPAN9O75954 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.36■□□□□ 0.69
TSPAN9O75954 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.36■□□□□ 0.69
TSPAN9O75954 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TSPAN9O75954 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TSPAN9O75954 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TSPAN9O75954 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TSPAN9O75954 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TSPAN9O75954 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.35■□□□□ 0.69
TSPAN9O75954 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TSPAN9O75954 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.35■□□□□ 0.69
TSPAN9O75954 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TSPAN9O75954 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TSPAN9O75954 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TSPAN9O75954 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
TSPAN9O75954 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TSPAN9O75954 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
TSPAN9O75954 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TSPAN9O75954 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TSPAN9O75954 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.34■□□□□ 0.69
TSPAN9O75954 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TSPAN9O75954 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TSPAN9O75954 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TSPAN9O75954 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TSPAN9O75954 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.34■□□□□ 0.69
TSPAN9O75954 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.34■□□□□ 0.69
TSPAN9O75954 AL035685.1-201ENST00000636663 812 ntBASIC19.34■□□□□ 0.69
TSPAN9O75954 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TSPAN9O75954 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TSPAN9O75954 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TSPAN9O75954 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TSPAN9O75954 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TSPAN9O75954 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TSPAN9O75954 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
TSPAN9O75954 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TSPAN9O75954 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TSPAN9O75954 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
TSPAN9O75954 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.32■□□□□ 0.68
TSPAN9O75954 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TSPAN9O75954 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.32■□□□□ 0.68
TSPAN9O75954 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TSPAN9O75954 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
TSPAN9O75954 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.32■□□□□ 0.68
TSPAN9O75954 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TSPAN9O75954 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TSPAN9O75954 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TSPAN9O75954 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TSPAN9O75954 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.32■□□□□ 0.68
TSPAN9O75954 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TSPAN9O75954 AL451085.2-201ENST00000605085 799 ntBASIC19.32■□□□□ 0.68
TSPAN9O75954 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TSPAN9O75954 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.32■□□□□ 0.68
TSPAN9O75954 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.32■□□□□ 0.68
TSPAN9O75954 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TSPAN9O75954 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TSPAN9O75954 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TSPAN9O75954 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TSPAN9O75954 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TSPAN9O75954 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TSPAN9O75954 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TSPAN9O75954 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TSPAN9O75954 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TSPAN9O75954 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TSPAN9O75954 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TSPAN9O75954 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.31■□□□□ 0.68
TSPAN9O75954 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TSPAN9O75954 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TSPAN9O75954 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.31■□□□□ 0.68
TSPAN9O75954 YBX1P4-201ENST00000392794 808 ntBASIC19.31■□□□□ 0.68
TSPAN9O75954 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.31■□□□□ 0.68
TSPAN9O75954 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TSPAN9O75954 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TSPAN9O75954 AL117328.2-201ENST00000624617 1940 ntBASIC19.31■□□□□ 0.68
TSPAN9O75954 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.31■□□□□ 0.68
TSPAN9O75954 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.31■□□□□ 0.68
TSPAN9O75954 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.3■□□□□ 0.68
TSPAN9O75954 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TSPAN9O75954 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TSPAN9O75954 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TSPAN9O75954 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TSPAN9O75954 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.29■□□□□ 0.68
TSPAN9O75954 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TSPAN9O75954 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TSPAN9O75954 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TSPAN9O75954 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TSPAN9O75954 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TSPAN9O75954 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TSPAN9O75954 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.29■□□□□ 0.68
TSPAN9O75954 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
TSPAN9O75954 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TSPAN9O75954 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TSPAN9O75954 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TSPAN9O75954 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms