Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-6A0A0B4J262 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-6A0A0B4J262 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TRAV8-6A0A0B4J262 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TRAV8-6A0A0B4J262 BRD4-212ENST00000630599 726 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAV8-6A0A0B4J262 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-6A0A0B4J262 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-6A0A0B4J262 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAV8-6A0A0B4J262 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-6A0A0B4J262 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-6A0A0B4J262 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-6A0A0B4J262 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-6A0A0B4J262 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-6A0A0B4J262 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-6A0A0B4J262 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV8-6A0A0B4J262 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV8-6A0A0B4J262 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TRAV8-6A0A0B4J262 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV8-6A0A0B4J262 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV8-6A0A0B4J262 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV8-6A0A0B4J262 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV8-6A0A0B4J262 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV8-6A0A0B4J262 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV8-6A0A0B4J262 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV8-6A0A0B4J262 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV8-6A0A0B4J262 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV8-6A0A0B4J262 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TRAV8-6A0A0B4J262 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV8-6A0A0B4J262 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV8-6A0A0B4J262 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV8-6A0A0B4J262 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV8-6A0A0B4J262 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAV8-6A0A0B4J262 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAV8-6A0A0B4J262 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TRAV8-6A0A0B4J262 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC16.6■□□□□ 0.25
TRAV8-6A0A0B4J262 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TRAV8-6A0A0B4J262 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV8-6A0A0B4J262 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV8-6A0A0B4J262 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV8-6A0A0B4J262 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV8-6A0A0B4J262 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV8-6A0A0B4J262 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.59■□□□□ 0.25
TRAV8-6A0A0B4J262 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV8-6A0A0B4J262 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV8-6A0A0B4J262 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV8-6A0A0B4J262 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV8-6A0A0B4J262 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV8-6A0A0B4J262 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV8-6A0A0B4J262 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV8-6A0A0B4J262 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV8-6A0A0B4J262 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV8-6A0A0B4J262 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAV8-6A0A0B4J262 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
TRAV8-6A0A0B4J262 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV8-6A0A0B4J262 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV8-6A0A0B4J262 AP003733.4-201ENST00000623785 1697 ntBASIC16.59■□□□□ 0.25
TRAV8-6A0A0B4J262 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV8-6A0A0B4J262 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV8-6A0A0B4J262 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
TRAV8-6A0A0B4J262 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC16.58■□□□□ 0.24
TRAV8-6A0A0B4J262 AC133552.2-201ENST00000619106 1032 ntBASIC16.58■□□□□ 0.24
TRAV8-6A0A0B4J262 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAV8-6A0A0B4J262 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
TRAV8-6A0A0B4J262 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAV8-6A0A0B4J262 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV8-6A0A0B4J262 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC16.58■□□□□ 0.24
TRAV8-6A0A0B4J262 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV8-6A0A0B4J262 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV8-6A0A0B4J262 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV8-6A0A0B4J262 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV8-6A0A0B4J262 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV8-6A0A0B4J262 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TRAV8-6A0A0B4J262 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.57■□□□□ 0.24
TRAV8-6A0A0B4J262 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV8-6A0A0B4J262 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV8-6A0A0B4J262 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV8-6A0A0B4J262 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
TRAV8-6A0A0B4J262 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV8-6A0A0B4J262 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRAV8-6A0A0B4J262 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV8-6A0A0B4J262 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV8-6A0A0B4J262 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC16.57■□□□□ 0.24
TRAV8-6A0A0B4J262 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TRAV8-6A0A0B4J262 HYI-213ENST00000583037 1322 ntTSL 5 BASIC16.57■□□□□ 0.24
TRAV8-6A0A0B4J262 KRT18P10-201ENST00000388836 1287 ntBASIC16.57■□□□□ 0.24
TRAV8-6A0A0B4J262 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV8-6A0A0B4J262 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV8-6A0A0B4J262 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV8-6A0A0B4J262 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV8-6A0A0B4J262 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV8-6A0A0B4J262 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV8-6A0A0B4J262 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAV8-6A0A0B4J262 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV8-6A0A0B4J262 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV8-6A0A0B4J262 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV8-6A0A0B4J262 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV8-6A0A0B4J262 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAV8-6A0A0B4J262 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV8-6A0A0B4J262 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV8-6A0A0B4J262 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 219.6 ms