Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ZNF253O75346 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ZNF253O75346 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC11.57□□□□□ -0.56
ZNF253O75346 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ZNF253O75346 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ZNF253O75346 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC11.57□□□□□ -0.56
ZNF253O75346 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC11.57□□□□□ -0.56
ZNF253O75346 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
ZNF253O75346 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ZNF253O75346 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
ZNF253O75346 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
ZNF253O75346 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC11.57□□□□□ -0.56
ZNF253O75346 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ZNF253O75346 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ZNF253O75346 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC11.57□□□□□ -0.56
ZNF253O75346 CENPM-205ENST00000404067 905 ntTSL 3 BASIC11.57□□□□□ -0.56
ZNF253O75346 MPV17-208ENST00000405076 603 ntTSL 5 BASIC11.57□□□□□ -0.56
ZNF253O75346 CENPM-206ENST00000407253 818 ntTSL 2 BASIC11.57□□□□□ -0.56
ZNF253O75346 AC254562.1-201ENST00000417586 456 ntBASIC11.57□□□□□ -0.56
ZNF253O75346 COX10-202ENST00000429152 875 ntTSL 2 BASIC11.57□□□□□ -0.56
ZNF253O75346 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ZNF253O75346 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ZNF253O75346 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ZNF253O75346 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ZNF253O75346 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC11.57□□□□□ -0.56
ZNF253O75346 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC11.57□□□□□ -0.56
ZNF253O75346 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC11.57□□□□□ -0.56
ZNF253O75346 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC11.57□□□□□ -0.56
ZNF253O75346 METTL23-205ENST00000588302 925 ntTSL 5 BASIC11.57□□□□□ -0.56
ZNF253O75346 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
ZNF253O75346 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC11.57□□□□□ -0.56
ZNF253O75346 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ZNF253O75346 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
ZNF253O75346 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
ZNF253O75346 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ZNF253O75346 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ZNF253O75346 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ZNF253O75346 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ZNF253O75346 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ZNF253O75346 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ZNF253O75346 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ZNF253O75346 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ZNF253O75346 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ZNF253O75346 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC11.57□□□□□ -0.56
ZNF253O75346 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ZNF253O75346 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ZNF253O75346 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC11.57□□□□□ -0.56
ZNF253O75346 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC11.57□□□□□ -0.56
ZNF253O75346 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
ZNF253O75346 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
ZNF253O75346 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC11.57□□□□□ -0.56
ZNF253O75346 USP4-203ENST00000415188 1454 ntTSL 3 BASIC11.57□□□□□ -0.56
ZNF253O75346 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
ZNF253O75346 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ZNF253O75346 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
ZNF253O75346 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
ZNF253O75346 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ZNF253O75346 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
ZNF253O75346 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ZNF253O75346 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
ZNF253O75346 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ZNF253O75346 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
ZNF253O75346 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
ZNF253O75346 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ZNF253O75346 CICP16-201ENST00000502609 2813 ntBASIC11.56□□□□□ -0.56
ZNF253O75346 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
ZNF253O75346 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
ZNF253O75346 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
ZNF253O75346 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ZNF253O75346 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ZNF253O75346 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
ZNF253O75346 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ZNF253O75346 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ZNF253O75346 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
ZNF253O75346 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
ZNF253O75346 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
ZNF253O75346 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
ZNF253O75346 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ZNF253O75346 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC11.56□□□□□ -0.56
ZNF253O75346 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
ZNF253O75346 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC11.56□□□□□ -0.56
ZNF253O75346 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ZNF253O75346 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ZNF253O75346 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
ZNF253O75346 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
ZNF253O75346 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
ZNF253O75346 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC11.56□□□□□ -0.56
ZNF253O75346 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC11.56□□□□□ -0.56
ZNF253O75346 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC11.56□□□□□ -0.56
ZNF253O75346 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC11.56□□□□□ -0.56
ZNF253O75346 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC11.56□□□□□ -0.56
ZNF253O75346 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
ZNF253O75346 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC11.56□□□□□ -0.56
ZNF253O75346 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ZNF253O75346 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC11.56□□□□□ -0.56
ZNF253O75346 LY6E-204ENST00000519546 971 ntTSL 2 BASIC11.56□□□□□ -0.56
ZNF253O75346 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
ZNF253O75346 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC11.56□□□□□ -0.56
ZNF253O75346 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC11.56□□□□□ -0.56
ZNF253O75346 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC11.56□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms