RNA–Protein interactions for RNA: ENST00000479054.5

NISCH-207, Transcript of nischarin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NISCH, Length 5,173 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NISCH-207ENST00000479054 NISCHQ9Y2I1 1504 aa24.83■■□□□ 1.57
NISCH-207ENST00000479054 DCAF8L2P0C7V8 631 aa24.12■■□□□ 1.45
NISCH-207ENST00000479054 SUPT5HO00267 1087 aaKnown RBP22.88■■□□□ 1.25
NISCH-207ENST00000479054 SHROOM4Q9ULL8 1493 aa22.82■■□□□ 1.24
NISCH-207ENST00000479054 FAM9AQ8IZU1 332 aaPredicted RBP21.85■■□□□ 1.09
NISCH-207ENST00000479054 EHMT2Q96KQ7 1210 aa21.64■■□□□ 1.06
NISCH-207ENST00000479054 APLP2Q06481 763 aa21.54■■□□□ 1.04
NISCH-207ENST00000479054 TRIM41Q8WV44 630 aa21.28■■□□□ 1
NISCH-207ENST00000479054 PCGF6Q9BYE7 350 aa21.12■□□□□ 0.97
NISCH-207ENST00000479054 PELP1Q8IZL8 1130 aaKnown RBP21.08■□□□□ 0.97
NISCH-207ENST00000479054 CHIC1Q5VXU3 224 aa20.9■□□□□ 0.94
NISCH-207ENST00000479054 ABCC9O60706 1549 aa20.9■□□□□ 0.94
NISCH-207ENST00000479054 TTBK1Q5TCY1 1321 aaPredicted RBP20.87■□□□□ 0.93
NISCH-207ENST00000479054 MYT1Q01538 1121 aa20.84■□□□□ 0.93
NISCH-207ENST00000479054 UBTFP17480 764 aaKnown RBP20.79■□□□□ 0.92
NISCH-207ENST00000479054 RANGAP1P46060 587 aaPredicted RBP20.77■□□□□ 0.92
NISCH-207ENST00000479054 ATP1B4Q9UN42 357 aaPredicted RBP20.77■□□□□ 0.92
NISCH-207ENST00000479054 ZCCHC6Q5VYS8 1495 aaKnown RBP20.66■□□□□ 0.9
NISCH-207ENST00000479054 LOC105371045A0A1W2PR82 267 aa20.63■□□□□ 0.89
NISCH-207ENST00000479054 CCDC180Q9P1Z9 1646 aa20.61■□□□□ 0.89
NISCH-207ENST00000479054 ZEB1P37275 1124 aaPredicted RBP20.6■□□□□ 0.89
NISCH-207ENST00000479054 CCER1Q8TC90 406 aaPredicted RBP20.53■□□□□ 0.88
NISCH-207ENST00000479054 PABPN1Q86U42 306 aaKnown RBP eCLIP20.52■□□□□ 0.871e-10■■■■□ 21.1
NISCH-207ENST00000479054 TRIM26Q12899 539 aaPredicted RBP20.48■□□□□ 0.87
NISCH-207ENST00000479054 PPARGC1BQ86YN6 1023 aaKnown RBP20.46■□□□□ 0.87
NISCH-207ENST00000479054 CENPBP07199 599 aaPredicted RBP20.35■□□□□ 0.85
NISCH-207ENST00000479054 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.3■□□□□ 0.84
NISCH-207ENST00000479054 HNRNPUL2Q1KMD3 747 aaKnown RBP20.3■□□□□ 0.84
NISCH-207ENST00000479054 MYT1LQ9UL68 1186 aa20.29■□□□□ 0.84
NISCH-207ENST00000479054 SCRIBQ14160 1630 aa20.25■□□□□ 0.83
NISCH-207ENST00000479054 HRCP23327 699 aa20.23■□□□□ 0.83
NISCH-207ENST00000479054 ERICH6Q7L0X2 663 aa20.01■□□□□ 0.79
NISCH-207ENST00000479054 ITGAEP38570 1179 aa19.93■□□□□ 0.78
NISCH-207ENST00000479054 DCAF1Q9Y4B6 1507 aa19.84■□□□□ 0.77
NISCH-207ENST00000479054 RB1CC1Q8TDY2 1594 aa19.84■□□□□ 0.77
NISCH-207ENST00000479054 CSRNP3Q8WYN3 585 aa19.83■□□□□ 0.77
NISCH-207ENST00000479054 NACADO15069 1562 aa19.82■□□□□ 0.76
NISCH-207ENST00000479054 RSF1Q96T23 1441 aaPredicted RBP19.78■□□□□ 0.76
NISCH-207ENST00000479054 FBLN2P98095 1184 aa19.77■□□□□ 0.76
NISCH-207ENST00000479054 YTHDC1Q96MU7 727 aaKnown RBP19.73■□□□□ 0.75
NISCH-207ENST00000479054 NEFLP07196 543 aa19.59■□□□□ 0.73
NISCH-207ENST00000479054 FAM50AQ14320 339 aaKnown RBP19.58■□□□□ 0.72
NISCH-207ENST00000479054 MYO15BQ96JP2 1530 aa19.51■□□□□ 0.71
NISCH-207ENST00000479054 POLR3GLQ9BT43 218 aa19.5■□□□□ 0.71
NISCH-207ENST00000479054 DIEXFQ68CQ4 756 aaKnown RBP19.46■□□□□ 0.71
NISCH-207ENST00000479054 CDK11AQ9UQ88 783 aaPredicted RBP19.46■□□□□ 0.71
NISCH-207ENST00000479054 CECR2Q9BXF3 1484 aa19.45■□□□□ 0.7
NISCH-207ENST00000479054 NPM1P06748 294 aaKnown RBP eCLIP19.44■□□□□ 0.7
NISCH-207ENST00000479054 P3H3Q8IVL6 736 aa19.43■□□□□ 0.7
NISCH-207ENST00000479054 TRIM52Q96A61 297 aa19.42■□□□□ 0.7
NISCH-207ENST00000479054 BAZ1AQ9NRL2 1556 aaPredicted RBP19.41■□□□□ 0.7
NISCH-207ENST00000479054 SLC4A1APQ9BWU0 796 aaKnown RBP19.4■□□□□ 0.7
NISCH-207ENST00000479054 BAZ1BQ9UIG0 1483 aaKnown RBP19.32■□□□□ 0.68
NISCH-207ENST00000479054 ESF1Q9H501 851 aaKnown RBP19.31■□□□□ 0.68
NISCH-207ENST00000479054 NEUROD1Q13562 356 aa19.3■□□□□ 0.68
NISCH-207ENST00000479054 EEA1Q15075 1411 aa19.27■□□□□ 0.68
NISCH-207ENST00000479054 WRNQ14191 1432 aaPredicted RBP eCLIP19.27■□□□□ 0.67
NISCH-207ENST00000479054 MROH2BQ7Z745 1585 aa19.24■□□□□ 0.67
NISCH-207ENST00000479054 ZNF316A6NFI3 1004 aaPredicted RBP19.2■□□□□ 0.66
NISCH-207ENST00000479054 ARID3CA6NKF2 412 aa19.19■□□□□ 0.66
NISCH-207ENST00000479054 GTF3C3Q9Y5Q9 886 aa19.19■□□□□ 0.66
NISCH-207ENST00000479054 CLIP1P30622 1438 aa19.18■□□□□ 0.66
NISCH-207ENST00000479054 BCANQ96GW7 911 aa19.17■□□□□ 0.66
NISCH-207ENST00000479054 GOLGA3Q08378 1498 aa19.15■□□□□ 0.66
NISCH-207ENST00000479054 CEP162Q5TB80 1403 aa19.14■□□□□ 0.65
NISCH-207ENST00000479054 CHMP7Q8WUX9 453 aaPredicted RBP19.13■□□□□ 0.65
NISCH-207ENST00000479054 CNGB1Q14028 1251 aaPredicted RBP19.12■□□□□ 0.65
NISCH-207ENST00000479054 ZNF777Q9ULD5 760 aaPredicted RBP19.11■□□□□ 0.65
NISCH-207ENST00000479054 TNIKQ9UKE5 1360 aa19.08■□□□□ 0.64
NISCH-207ENST00000479054 CCDC88BA6NC98 1476 aa19.05■□□□□ 0.64
NISCH-207ENST00000479054 CEP164Q9UPV0 1460 aa19.02■□□□□ 0.64
NISCH-207ENST00000479054 KIF27Q86VH2 1401 aa19.02■□□□□ 0.64
NISCH-207ENST00000479054 ZNF326Q5BKZ1 582 aaKnown RBP19.01■□□□□ 0.63
NISCH-207ENST00000479054 STAG3Q9UJ98 1225 aa19■□□□□ 0.63
NISCH-207ENST00000479054 DAXXQ9UER7 740 aaPredicted RBP18.98■□□□□ 0.63
NISCH-207ENST00000479054 ACIN1Q9UKV3 1341 aaKnown RBP18.98■□□□□ 0.63
NISCH-207ENST00000479054 WIZO95785 1651 aa18.97■□□□□ 0.63
NISCH-207ENST00000479054 ERCC6Q03468 1493 aa18.97■□□□□ 0.63
NISCH-207ENST00000479054 SOGA1O94964 1423 aa18.96■□□□□ 0.63
NISCH-207ENST00000479054 ANP32CO43423 234 aa18.95■□□□□ 0.62
NISCH-207ENST00000479054 NEFMP07197 916 aa18.95■□□□□ 0.62
NISCH-207ENST00000479054 SMARCA2P51531 1590 aa18.92■□□□□ 0.62
NISCH-207ENST00000479054 TOP2AP11388 1531 aaKnown RBP18.91■□□□□ 0.62
NISCH-207ENST00000479054 MTUS2Q5JR59 1369 aa18.9■□□□□ 0.62
NISCH-207ENST00000479054 ABCC8Q09428 1581 aa18.9■□□□□ 0.62
NISCH-207ENST00000479054 TSPY4P0CV99 314 aa18.85■□□□□ 0.61
NISCH-207ENST00000479054 TSPY10P0CW01 314 aa18.85■□□□□ 0.61
NISCH-207ENST00000479054 RTL5Q5HYW3 569 aaPredicted RBP18.85■□□□□ 0.61
NISCH-207ENST00000479054 TONSLQ96HA7 1378 aa18.83■□□□□ 0.61
NISCH-207ENST00000479054 CHIC2Q9UKJ5 165 aa18.82■□□□□ 0.6
NISCH-207ENST00000479054 CHGAP10645 457 aaKnown RBP18.81■□□□□ 0.6
NISCH-207ENST00000479054 SMARCA4P51532 1647 aa18.78■□□□□ 0.6
NISCH-207ENST00000479054 ZBTB47Q9UFB7 747 aaPredicted RBP18.76■□□□□ 0.59
NISCH-207ENST00000479054 CUX2O14529 1486 aa18.75■□□□□ 0.59
NISCH-207ENST00000479054 PLEKHD1A6NEE1 506 aa18.75■□□□□ 0.59
NISCH-207ENST00000479054 ATAD2BQ9ULI0 1458 aa18.74■□□□□ 0.59
NISCH-207ENST00000479054 SCAF1Q9H7N4 1312 aaKnown RBP18.73■□□□□ 0.59
NISCH-207ENST00000479054 CARMIL1Q5VZK9 1371 aa18.73■□□□□ 0.59
NISCH-207ENST00000479054 PLPPR3Q6T4P5 718 aa18.73■□□□□ 0.59
NISCH-207ENST00000479054 CLSPNQ9HAW4 1339 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms