Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 AC112504.1-201ENST00000623415 1841 ntBASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 AC012508.2-201ENST00000567613 1472 ntBASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 AL162727.3-201ENST00000635661 2787 ntBASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 AC092570.1-201ENST00000414446 469 ntBASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 ALG3P1-201ENST00000508806 1114 ntBASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 CTBP2P6-201ENST00000526402 1229 ntBASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 KNOP1P1-201ENST00000542108 989 ntBASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 AC142086.5-202ENST00000562500 217 ntBASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 SIGLEC22P-201ENST00000599104 714 ntBASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 AP000769.1-203ENST00000637245 208 ntBASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RSPO4Q2I0M5 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 FAM197Y6-201ENST00000420524 766 ntBASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 EEF1DP5-201ENST00000431410 772 ntBASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 MAGEA7P-201ENST00000436482 942 ntBASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 AC131206.1-201ENST00000538078 1211 ntBASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 AC080013.5-201ENST00000607044 679 ntBASIC14.11□□□□□ -0.15
RSPO4Q2I0M5 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms