Protein–RNA interactions for Protein: P54849

EMP1, Epithelial membrane protein 1, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMP1P54849 INE1-201ENST00000456273 945 ntBASIC11.14□□□□□ -0.63
EMP1P54849 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC11.14□□□□□ -0.63
EMP1P54849 NEU3-203ENST00000529024 581 ntTSL 3 BASIC11.14□□□□□ -0.63
EMP1P54849 TMEM261P1-201ENST00000604899 340 ntBASIC11.14□□□□□ -0.63
EMP1P54849 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
EMP1P54849 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
EMP1P54849 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC11.14□□□□□ -0.63
EMP1P54849 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
EMP1P54849 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
EMP1P54849 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
EMP1P54849 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC11.14□□□□□ -0.63
EMP1P54849 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC11.14□□□□□ -0.63
EMP1P54849 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
EMP1P54849 KRT8P22-201ENST00000562317 1415 ntBASIC11.14□□□□□ -0.63
EMP1P54849 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
EMP1P54849 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
EMP1P54849 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
EMP1P54849 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC11.14□□□□□ -0.63
EMP1P54849 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
EMP1P54849 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
EMP1P54849 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
EMP1P54849 TP73-211ENST00000604074 4806 ntTSL 5 BASIC11.14□□□□□ -0.63
EMP1P54849 AC140479.7-201ENST00000636301 2332 ntBASIC11.14□□□□□ -0.63
EMP1P54849 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
EMP1P54849 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
EMP1P54849 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
EMP1P54849 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
EMP1P54849 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
EMP1P54849 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
EMP1P54849 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC11.14□□□□□ -0.63
EMP1P54849 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
EMP1P54849 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
EMP1P54849 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
EMP1P54849 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
EMP1P54849 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
EMP1P54849 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
EMP1P54849 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
EMP1P54849 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
EMP1P54849 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
EMP1P54849 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
EMP1P54849 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
EMP1P54849 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
EMP1P54849 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
EMP1P54849 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
EMP1P54849 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
EMP1P54849 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
EMP1P54849 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC11.13□□□□□ -0.63
EMP1P54849 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
EMP1P54849 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
EMP1P54849 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
EMP1P54849 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
EMP1P54849 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
EMP1P54849 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
EMP1P54849 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
EMP1P54849 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
EMP1P54849 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
EMP1P54849 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
EMP1P54849 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
EMP1P54849 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC11.13□□□□□ -0.63
EMP1P54849 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
EMP1P54849 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
EMP1P54849 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
EMP1P54849 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
EMP1P54849 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
EMP1P54849 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
EMP1P54849 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
EMP1P54849 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
EMP1P54849 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
EMP1P54849 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
EMP1P54849 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
EMP1P54849 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC11.13□□□□□ -0.63
EMP1P54849 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
EMP1P54849 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC11.13□□□□□ -0.63
EMP1P54849 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC11.13□□□□□ -0.63
EMP1P54849 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC11.13□□□□□ -0.63
EMP1P54849 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC11.13□□□□□ -0.63
EMP1P54849 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
EMP1P54849 RHOA-206ENST00000454011 889 ntTSL 2 BASIC11.13□□□□□ -0.63
EMP1P54849 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC11.13□□□□□ -0.63
EMP1P54849 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
EMP1P54849 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC11.13□□□□□ -0.63
EMP1P54849 POLE2-203ENST00000553805 496 ntTSL 2 BASIC11.13□□□□□ -0.63
EMP1P54849 AC005225.4-201ENST00000557330 545 ntBASIC11.13□□□□□ -0.63
EMP1P54849 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
EMP1P54849 AC120045.2-201ENST00000567334 178 ntBASIC11.13□□□□□ -0.63
EMP1P54849 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
EMP1P54849 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC11.13□□□□□ -0.63
EMP1P54849 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC11.13□□□□□ -0.63
EMP1P54849 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC11.13□□□□□ -0.63
EMP1P54849 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC11.13□□□□□ -0.63
EMP1P54849 AL035252.4-201ENST00000624174 288 ntBASIC11.13□□□□□ -0.63
EMP1P54849 HADH-212ENST00000638621 741 ntTSL 5 BASIC11.13□□□□□ -0.63
EMP1P54849 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
EMP1P54849 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
EMP1P54849 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC11.13□□□□□ -0.63
EMP1P54849 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC11.13□□□□□ -0.63
EMP1P54849 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
EMP1P54849 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC11.13□□□□□ -0.63
EMP1P54849 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
EMP1P54849 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms