RNA–Protein interactions for RNA: ENST00000366742.5

MRPL55-215, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-215ENST00000366742 NISCHQ9Y2I1 1504 aa38■■■■□ 3.67
MRPL55-215ENST00000366742 CCDC180Q9P1Z9 1646 aa33.75■■■□□ 2.99
MRPL55-215ENST00000366742 ABCC9O60706 1549 aa33.1■■■□□ 2.89
MRPL55-215ENST00000366742 RB1CC1Q8TDY2 1594 aa31.79■■■□□ 2.68
MRPL55-215ENST00000366742 NACADO15069 1562 aa31.77■■■□□ 2.68
MRPL55-215ENST00000366742 DCAF8L2P0C7V8 631 aa31.72■■■□□ 2.67
MRPL55-215ENST00000366742 ZCCHC6Q5VYS8 1495 aaKnown RBP31.65■■■□□ 2.66
MRPL55-215ENST00000366742 MYO15BQ96JP2 1530 aa31.6■■■□□ 2.65
MRPL55-215ENST00000366742 DCAF1Q9Y4B6 1507 aa31.44■■■□□ 2.62
MRPL55-215ENST00000366742 UNC13AQ9UPW8 1703 aa31.06■■■□□ 2.56
MRPL55-215ENST00000366742 PABPN1Q86U42 306 aaKnown RBP eCLIP30.95■■■□□ 2.55
MRPL55-215ENST00000366742 BICRAQ9NZM4 1560 aa30.89■■■□□ 2.54
MRPL55-215ENST00000366742 SCRIBQ14160 1630 aa30.8■■■□□ 2.52
MRPL55-215ENST00000366742 SHROOM4Q9ULL8 1493 aa30.53■■■□□ 2.48
MRPL55-215ENST00000366742 DNAJC5BQ9UF47 199 aa30.51■■■□□ 2.47
MRPL55-215ENST00000366742 EIF4G1Q04637 1599 aaKnown RBP30.05■■■□□ 2.4
MRPL55-215ENST00000366742 CC2D2AQ9P2K1 1620 aa29.93■■■□□ 2.38
MRPL55-215ENST00000366742 CECR2Q9BXF3 1484 aa29.75■■■□□ 2.35
MRPL55-215ENST00000366742 SMARCA4P51532 1647 aa29.47■■■□□ 2.31
MRPL55-215ENST00000366742 BAZ1AQ9NRL2 1556 aaPredicted RBP29.42■■■□□ 2.3
MRPL55-215ENST00000366742 NCAPD3P42695 1498 aa29.36■■■□□ 2.29
MRPL55-215ENST00000366742 ATAD2BQ9ULI0 1458 aa29.36■■■□□ 2.29
MRPL55-215ENST00000366742 MROH2BQ7Z745 1585 aa29.3■■■□□ 2.28
MRPL55-215ENST00000366742 SMARCA2P51531 1590 aa29.28■■■□□ 2.28
MRPL55-215ENST00000366742 PEG3Q9GZU2 1588 aa29.21■■■□□ 2.27
MRPL55-215ENST00000366742 HMGXB3Q12766 1538 aa29.17■■■□□ 2.26
MRPL55-215ENST00000366742 BAZ1BQ9UIG0 1483 aaKnown RBP29.07■■■□□ 2.24
MRPL55-215ENST00000366742 RSF1Q96T23 1441 aaPredicted RBP28.95■■■□□ 2.23
MRPL55-215ENST00000366742 WIZO95785 1651 aa28.93■■■□□ 2.22
MRPL55-215ENST00000366742 NESP48681 1621 aa28.65■■■□□ 2.18
MRPL55-215ENST00000366742 TOP2AP11388 1531 aaKnown RBP28.64■■■□□ 2.17
MRPL55-215ENST00000366742 LAMC3Q9Y6N6 1575 aa28.54■■■□□ 2.16
MRPL55-215ENST00000366742 ERCC6Q03468 1493 aa28.5■■■□□ 2.15
MRPL55-215ENST00000366742 CADPSQ9ULU8 1353 aa28.49■■■□□ 2.15
MRPL55-215ENST00000366742 PDS5BQ9NTI5 1447 aa28.35■■■□□ 2.13
MRPL55-215ENST00000366742 CCDC88BA6NC98 1476 aa28.33■■■□□ 2.13
MRPL55-215ENST00000366742 CFTRP13569 1480 aa28.32■■■□□ 2.12
MRPL55-215ENST00000366742 KIF21AQ7Z4S6 1674 aa28.26■■■□□ 2.11
MRPL55-215ENST00000366742 CUX2O14529 1486 aa28.25■■■□□ 2.11
MRPL55-215ENST00000366742 THOC2Q8NI27 1593 aaKnown RBP28.2■■■□□ 2.11
MRPL55-215ENST00000366742 FANCD2Q9BXW9 1451 aa28.15■■■□□ 2.1
MRPL55-215ENST00000366742 SUPT5HO00267 1087 aaKnown RBP28.14■■■□□ 2.1
MRPL55-215ENST00000366742 CEP164Q9UPV0 1460 aa28.08■■■□□ 2.09
MRPL55-215ENST00000366742 MRC2Q9UBG0 1479 aa28.08■■■□□ 2.09
MRPL55-215ENST00000366742 WDR62O43379 1518 aa27.99■■■□□ 2.07
MRPL55-215ENST00000366742 PRDM2Q13029 1718 aa27.99■■■□□ 2.07
MRPL55-215ENST00000366742 URB2Q14146 1524 aaKnown RBP27.88■■■□□ 2.05
MRPL55-215ENST00000366742 TOPBP1Q92547 1522 aa27.69■■■□□ 2.02
MRPL55-215ENST00000366742 ABCC8Q09428 1581 aa27.66■■■□□ 2.02
MRPL55-215ENST00000366742 DNMBPQ6XZF7 1577 aa27.64■■■□□ 2.01
MRPL55-215ENST00000366742 IFT140Q96RY7 1462 aa27.52■■■□□ 2
MRPL55-215ENST00000366742 CUX1P39880 1505 aa27.48■■□□□ 1.99
MRPL55-215ENST00000366742 DNAJC5Q9H3Z4 198 aa27.48■■□□□ 1.99
MRPL55-215ENST00000366742 POLA1P09884 1462 aaPredicted RBP27.46■■□□□ 1.99
MRPL55-215ENST00000366742 ZNF608Q9ULD9 1512 aaPredicted RBP27.43■■□□□ 1.98
MRPL55-215ENST00000366742 TARBP1Q13395 1621 aaKnown RBP27.4■■□□□ 1.98
MRPL55-215ENST00000366742 FGD5Q6ZNL6 1462 aa27.38■■□□□ 1.97
MRPL55-215ENST00000366742 RAD54L2Q9Y4B4 1467 aa27.35■■□□□ 1.97
MRPL55-215ENST00000366742 SOGA1O94964 1423 aa27.34■■□□□ 1.97
MRPL55-215ENST00000366742 WRNQ14191 1432 aaPredicted RBP eCLIP27.27■■□□□ 1.96
MRPL55-215ENST00000366742 EIF4G3O43432 1585 aaKnown RBP27.26■■□□□ 1.96
MRPL55-215ENST00000366742 AQRO60306 1485 aaKnown RBP eCLIP27.26■■□□□ 1.958e-7■■■■■ 27.9
MRPL55-215ENST00000366742 SYNJ1O43426 1573 aa27.21■■□□□ 1.95
MRPL55-215ENST00000366742 TDRD9Q8NDG6 1382 aaKnown RBP27.21■■□□□ 1.95
MRPL55-215ENST00000366742 TOP2BQ02880 1626 aa27.2■■□□□ 1.95
MRPL55-215ENST00000366742 BIVM-ERCC5R4GMW8 1640 aa27.19■■□□□ 1.94
MRPL55-215ENST00000366742 WDR97A6NE52 1622 aa27.14■■□□□ 1.94
MRPL55-215ENST00000366742 ABCA10Q8WWZ4 1543 aa27.12■■□□□ 1.93
MRPL55-215ENST00000366742 OSCARQ8IYS5 282 aa27.08■■□□□ 1.93
MRPL55-215ENST00000366742 GRIN2BQ13224 1484 aa27.02■■□□□ 1.92
MRPL55-215ENST00000366742 GAPVD1Q14C86 1478 aa27.02■■□□□ 1.92
MRPL55-215ENST00000366742 ABCA5Q8WWZ7 1642 aa27■■□□□ 1.91
MRPL55-215ENST00000366742 SNAPC4Q5SXM2 1469 aa26.99■■□□□ 1.91
MRPL55-215ENST00000366742 MAGI1Q96QZ7 1491 aaPredicted RBP26.95■■□□□ 1.91
MRPL55-215ENST00000366742 PBRM1Q86U86 1689 aa26.91■■□□□ 1.9
MRPL55-215ENST00000366742 CHD1O14646 1710 aa26.9■■□□□ 1.9
MRPL55-215ENST00000366742 FBLN2P98095 1184 aa26.9■■□□□ 1.9
MRPL55-215ENST00000366742 SYNJ2O15056 1496 aa26.85■■□□□ 1.89
MRPL55-215ENST00000366742 CHMP7Q8WUX9 453 aaPredicted RBP26.83■■□□□ 1.89
MRPL55-215ENST00000366742 ERICH3Q5RHP9 1530 aa26.78■■□□□ 1.88
MRPL55-215ENST00000366742 ADAMTS12P58397 1594 aa26.74■■□□□ 1.87
MRPL55-215ENST00000366742 FHAD1B1AJZ9 1412 aa26.72■■□□□ 1.87
MRPL55-215ENST00000366742 KIF27Q86VH2 1401 aa26.7■■□□□ 1.86
MRPL55-215ENST00000366742 CLASP1Q7Z460 1538 aa26.68■■□□□ 1.86
MRPL55-215ENST00000366742 GRIN2AQ12879 1464 aa26.68■■□□□ 1.86
MRPL55-215ENST00000366742 IGF1RP08069 1367 aa26.65■■□□□ 1.86
MRPL55-215ENST00000366742 ARHGEF11O15085 1522 aa26.63■■□□□ 1.85
MRPL55-215ENST00000366742 RIMBP3CA6NJZ7 1639 aa26.62■■□□□ 1.85
MRPL55-215ENST00000366742 RIMBP3BA6NNM3 1639 aa26.62■■□□□ 1.85
MRPL55-215ENST00000366742 RIMBP3Q9UFD9 1639 aa26.62■■□□□ 1.85
MRPL55-215ENST00000366742 NUP160Q12769 1436 aa26.58■■□□□ 1.85
MRPL55-215ENST00000366742 TRIM41Q8WV44 630 aa26.58■■□□□ 1.85
MRPL55-215ENST00000366742 CEP170Q5SW79 1584 aa26.54■■□□□ 1.84
MRPL55-215ENST00000366742 CUL7Q14999 1698 aa26.48■■□□□ 1.83
MRPL55-215ENST00000366742 RUSC2Q8N2Y8 1516 aa26.48■■□□□ 1.83
MRPL55-215ENST00000366742 CARMIL1Q5VZK9 1371 aa26.46■■□□□ 1.83
MRPL55-215ENST00000366742 ARAP1Q96P48 1450 aa26.43■■□□□ 1.82
MRPL55-215ENST00000366742 CYB5RLQ6IPT4 315 aa26.4■■□□□ 1.82
MRPL55-215ENST00000366742 SHROOM2Q13796 1616 aa26.36■■□□□ 1.81
MRPL55-215ENST00000366742 ERCC6L2Q5T890 1561 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms