Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2OQ9C0C9 INE2-201ENST00000630399 1874 ntBASIC16.23■□□□□ 0.19
UBE2OQ9C0C9 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.23■□□□□ 0.19
UBE2OQ9C0C9 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2OQ9C0C9 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2OQ9C0C9 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2OQ9C0C9 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2OQ9C0C9 COX20P1-201ENST00000366529 357 ntBASIC16.23■□□□□ 0.19
UBE2OQ9C0C9 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2OQ9C0C9 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
UBE2OQ9C0C9 SERBP1P2-201ENST00000436888 1164 ntBASIC16.23■□□□□ 0.19
UBE2OQ9C0C9 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2OQ9C0C9 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.23■□□□□ 0.19
UBE2OQ9C0C9 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC16.23■□□□□ 0.19
UBE2OQ9C0C9 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC16.23■□□□□ 0.19
UBE2OQ9C0C9 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
UBE2OQ9C0C9 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC16.23■□□□□ 0.19
UBE2OQ9C0C9 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
UBE2OQ9C0C9 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC16.23■□□□□ 0.19
UBE2OQ9C0C9 AL451007.2-201ENST00000632004 563 ntBASIC16.23■□□□□ 0.19
UBE2OQ9C0C9 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2OQ9C0C9 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2OQ9C0C9 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2OQ9C0C9 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2OQ9C0C9 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2OQ9C0C9 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.23■□□□□ 0.19
UBE2OQ9C0C9 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2OQ9C0C9 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
UBE2OQ9C0C9 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2OQ9C0C9 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2OQ9C0C9 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2OQ9C0C9 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.23■□□□□ 0.19
UBE2OQ9C0C9 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBE2OQ9C0C9 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 HNRNPA1P58-201ENST00000403629 610 ntBASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 BANF1P3-201ENST00000412556 261 ntBASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 RPSAP15-201ENST00000448168 861 ntBASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 MRPL22P1-201ENST00000505398 616 ntBASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 AC027139.1-201ENST00000565286 951 ntBASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 AC008825.2-201ENST00000603374 718 ntBASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBE2OQ9C0C9 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 UROS-201ENST00000368774 744 ntTSL 2 BASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms