RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 NISCHQ9Y2I1 1504 aa35.73■■■■□ 3.31
CCNE1-203ENST00000444983 CCDC180Q9P1Z9 1646 aa31.49■■■□□ 2.63
CCNE1-203ENST00000444983 ABCC9O60706 1549 aa30.17■■■□□ 2.42
CCNE1-203ENST00000444983 ZCCHC6Q5VYS8 1495 aaKnown RBP29.91■■■□□ 2.38
CCNE1-203ENST00000444983 DCAF1Q9Y4B6 1507 aa29.62■■■□□ 2.33
CCNE1-203ENST00000444983 MYO15BQ96JP2 1530 aa29.53■■■□□ 2.32
CCNE1-203ENST00000444983 DCAF8L2P0C7V8 631 aa29.49■■■□□ 2.31
CCNE1-203ENST00000444983 NACADO15069 1562 aa29.45■■■□□ 2.3
CCNE1-203ENST00000444983 RB1CC1Q8TDY2 1594 aa29.31■■■□□ 2.28
CCNE1-203ENST00000444983 SCRIBQ14160 1630 aa28.73■■■□□ 2.19
CCNE1-203ENST00000444983 UNC13AQ9UPW8 1703 aa28.72■■■□□ 2.19
CCNE1-203ENST00000444983 SHROOM4Q9ULL8 1493 aa28.52■■■□□ 2.16
CCNE1-203ENST00000444983 BICRAQ9NZM4 1560 aa28.47■■■□□ 2.15
CCNE1-203ENST00000444983 PABPN1Q86U42 306 aaKnown RBP eCLIP28.29■■■□□ 2.12
CCNE1-203ENST00000444983 CECR2Q9BXF3 1484 aa27.78■■■□□ 2.04
CCNE1-203ENST00000444983 BAZ1AQ9NRL2 1556 aaPredicted RBP27.63■■■□□ 2.01
CCNE1-203ENST00000444983 EIF4G1Q04637 1599 aaKnown RBP27.62■■■□□ 2.01
CCNE1-203ENST00000444983 SMARCA4P51532 1647 aa27.59■■■□□ 2.01
CCNE1-203ENST00000444983 MROH2BQ7Z745 1585 aa27.56■■■□□ 2
CCNE1-203ENST00000444983 RSF1Q96T23 1441 aaPredicted RBP27.47■■□□□ 1.99
CCNE1-203ENST00000444983 CC2D2AQ9P2K1 1620 aa27.35■■□□□ 1.97
CCNE1-203ENST00000444983 PEG3Q9GZU2 1588 aa27.35■■□□□ 1.97
CCNE1-203ENST00000444983 ATAD2BQ9ULI0 1458 aa27.29■■□□□ 1.96
CCNE1-203ENST00000444983 WIZO95785 1651 aa27.28■■□□□ 1.96
CCNE1-203ENST00000444983 SMARCA2P51531 1590 aa27.25■■□□□ 1.95
CCNE1-203ENST00000444983 DNAJC5BQ9UF47 199 aa27.2■■□□□ 1.94
CCNE1-203ENST00000444983 NCAPD3P42695 1498 aa27.19■■□□□ 1.94
CCNE1-203ENST00000444983 SUPT5HO00267 1087 aaKnown RBP27.15■■□□□ 1.94
CCNE1-203ENST00000444983 HMGXB3Q12766 1538 aa27.1■■□□□ 1.93
CCNE1-203ENST00000444983 BAZ1BQ9UIG0 1483 aaKnown RBP27.05■■□□□ 1.92
CCNE1-203ENST00000444983 TOP2AP11388 1531 aaKnown RBP27.01■■□□□ 1.91
CCNE1-203ENST00000444983 CCDC88BA6NC98 1476 aa26.71■■□□□ 1.87
CCNE1-203ENST00000444983 CFTRP13569 1480 aa26.41■■□□□ 1.82
CCNE1-203ENST00000444983 CADPSQ9ULU8 1353 aa26.41■■□□□ 1.82
CCNE1-203ENST00000444983 LAMC3Q9Y6N6 1575 aa26.34■■□□□ 1.81
CCNE1-203ENST00000444983 NESP48681 1621 aa26.33■■□□□ 1.8
CCNE1-203ENST00000444983 PRDM2Q13029 1718 aa26.24■■□□□ 1.79
CCNE1-203ENST00000444983 PDS5BQ9NTI5 1447 aa26.12■■□□□ 1.77
CCNE1-203ENST00000444983 FANCD2Q9BXW9 1451 aa26.08■■□□□ 1.77
CCNE1-203ENST00000444983 KIF21AQ7Z4S6 1674 aa26.03■■□□□ 1.76
CCNE1-203ENST00000444983 CEP164Q9UPV0 1460 aa25.97■■□□□ 1.75
CCNE1-203ENST00000444983 ABCC8Q09428 1581 aa25.91■■□□□ 1.74
CCNE1-203ENST00000444983 ERCC6Q03468 1493 aa25.9■■□□□ 1.74
CCNE1-203ENST00000444983 WRNQ14191 1432 aaPredicted RBP eCLIP25.84■■□□□ 1.73
CCNE1-203ENST00000444983 URB2Q14146 1524 aaKnown RBP25.81■■□□□ 1.72
CCNE1-203ENST00000444983 MRC2Q9UBG0 1479 aa25.81■■□□□ 1.72
CCNE1-203ENST00000444983 THOC2Q8NI27 1593 aaKnown RBP25.81■■□□□ 1.72
CCNE1-203ENST00000444983 CUX1P39880 1505 aa25.81■■□□□ 1.72
CCNE1-203ENST00000444983 SYNJ1O43426 1573 aa25.78■■□□□ 1.72
CCNE1-203ENST00000444983 CHIC1Q5VXU3 224 aa25.77■■□□□ 1.72
CCNE1-203ENST00000444983 DNMBPQ6XZF7 1577 aa25.77■■□□□ 1.72
CCNE1-203ENST00000444983 TOPBP1Q92547 1522 aa25.76■■□□□ 1.71
CCNE1-203ENST00000444983 TOP2BQ02880 1626 aa25.75■■□□□ 1.71
CCNE1-203ENST00000444983 WDR62O43379 1518 aa25.75■■□□□ 1.71
CCNE1-203ENST00000444983 BIVM-ERCC5R4GMW8 1640 aa25.75■■□□□ 1.71
CCNE1-203ENST00000444983 TRIM41Q8WV44 630 aa25.63■■□□□ 1.69
CCNE1-203ENST00000444983 FGD5Q6ZNL6 1462 aa25.6■■□□□ 1.69
CCNE1-203ENST00000444983 POLA1P09884 1462 aaPredicted RBP25.58■■□□□ 1.69
CCNE1-203ENST00000444983 CUX2O14529 1486 aa25.53■■□□□ 1.68
CCNE1-203ENST00000444983 SOGA1O94964 1423 aa25.47■■□□□ 1.67
CCNE1-203ENST00000444983 TARBP1Q13395 1621 aaKnown RBP25.46■■□□□ 1.67
CCNE1-203ENST00000444983 RAD54L2Q9Y4B4 1467 aa25.46■■□□□ 1.67
CCNE1-203ENST00000444983 IFT140Q96RY7 1462 aa25.42■■□□□ 1.66
CCNE1-203ENST00000444983 ABCA10Q8WWZ4 1543 aa25.41■■□□□ 1.66
CCNE1-203ENST00000444983 WDR97A6NE52 1622 aa25.4■■□□□ 1.66
CCNE1-203ENST00000444983 ZNF608Q9ULD9 1512 aaPredicted RBP25.28■■□□□ 1.64
CCNE1-203ENST00000444983 RUSC2Q8N2Y8 1516 aa25.26■■□□□ 1.63
CCNE1-203ENST00000444983 ABCA5Q8WWZ7 1642 aa25.25■■□□□ 1.63
CCNE1-203ENST00000444983 TDRD9Q8NDG6 1382 aaKnown RBP25.25■■□□□ 1.63
CCNE1-203ENST00000444983 KIF27Q86VH2 1401 aa25.24■■□□□ 1.63
CCNE1-203ENST00000444983 AQRO60306 1485 aaKnown RBP eCLIP25.2■■□□□ 1.62
CCNE1-203ENST00000444983 EIF4G3O43432 1585 aaKnown RBP25.19■■□□□ 1.62
CCNE1-203ENST00000444983 GAPVD1Q14C86 1478 aa25.19■■□□□ 1.62
CCNE1-203ENST00000444983 EEA1Q15075 1411 aa25.18■■□□□ 1.62
CCNE1-203ENST00000444983 IGF1RP08069 1367 aa25.11■■□□□ 1.61
CCNE1-203ENST00000444983 PBRM1Q86U86 1689 aa25.1■■□□□ 1.61
CCNE1-203ENST00000444983 ERICH3Q5RHP9 1530 aa25.1■■□□□ 1.61
CCNE1-203ENST00000444983 GRIN2BQ13224 1484 aa25.09■■□□□ 1.61
CCNE1-203ENST00000444983 CSRNP3Q8WYN3 585 aa25.06■■□□□ 1.6
CCNE1-203ENST00000444983 FAM9AQ8IZU1 332 aaPredicted RBP25.05■■□□□ 1.6
CCNE1-203ENST00000444983 CUL7Q14999 1698 aa24.97■■□□□ 1.59
CCNE1-203ENST00000444983 PRXQ9BXM0 1461 aa24.97■■□□□ 1.59
CCNE1-203ENST00000444983 MAGI1Q96QZ7 1491 aaPredicted RBP24.96■■□□□ 1.59
CCNE1-203ENST00000444983 SNAPC4Q5SXM2 1469 aa24.96■■□□□ 1.59
CCNE1-203ENST00000444983 ADAMTS12P58397 1594 aa24.94■■□□□ 1.58
CCNE1-203ENST00000444983 CARMIL1Q5VZK9 1371 aa24.94■■□□□ 1.58
CCNE1-203ENST00000444983 FHAD1B1AJZ9 1412 aa24.91■■□□□ 1.58
CCNE1-203ENST00000444983 KIF21BO75037 1637 aa24.89■■□□□ 1.58
CCNE1-203ENST00000444983 SYNJ2O15056 1496 aa24.87■■□□□ 1.57
CCNE1-203ENST00000444983 RAPGEF2Q9Y4G8 1499 aa24.86■■□□□ 1.57
CCNE1-203ENST00000444983 GRIN2AQ12879 1464 aa24.79■■□□□ 1.56
CCNE1-203ENST00000444983 GOLGA3Q08378 1498 aa24.76■■□□□ 1.55
CCNE1-203ENST00000444983 CHD1O14646 1710 aa24.76■■□□□ 1.55
CCNE1-203ENST00000444983 CHMP7Q8WUX9 453 aaPredicted RBP24.75■■□□□ 1.55
CCNE1-203ENST00000444983 LOC105371045A0A1W2PR82 267 aa24.71■■□□□ 1.55
CCNE1-203ENST00000444983 FBLN2P98095 1184 aa24.7■■□□□ 1.54
CCNE1-203ENST00000444983 NUP160Q12769 1436 aa24.67■■□□□ 1.54
CCNE1-203ENST00000444983 CEP170Q5SW79 1584 aa24.65■■□□□ 1.54
CCNE1-203ENST00000444983 EHMT2Q96KQ7 1210 aa24.65■■□□□ 1.54
CCNE1-203ENST00000444983 TNIKQ9UKE5 1360 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms