Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHRNB1P11230 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
CHRNB1P11230 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB1P11230 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB1P11230 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CHRNB1P11230 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC14.94□□□□□ -0.02
CHRNB1P11230 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC14.94□□□□□ -0.02
CHRNB1P11230 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB1P11230 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB1P11230 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB1P11230 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.94□□□□□ -0.02
CHRNB1P11230 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.94□□□□□ -0.02
CHRNB1P11230 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB1P11230 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB1P11230 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.94□□□□□ -0.02
CHRNB1P11230 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB1P11230 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB1P11230 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB1P11230 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CHRNB1P11230 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB1P11230 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB1P11230 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB1P11230 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB1P11230 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CHRNB1P11230 BANF1P3-201ENST00000412556 261 ntBASIC14.94□□□□□ -0.02
CHRNB1P11230 AC097065.1-201ENST00000425737 517 ntBASIC14.94□□□□□ -0.02
CHRNB1P11230 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB1P11230 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB1P11230 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB1P11230 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB1P11230 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC14.94□□□□□ -0.02
CHRNB1P11230 AC131206.1-201ENST00000538078 1211 ntBASIC14.94□□□□□ -0.02
CHRNB1P11230 AC093752.3-201ENST00000567343 901 ntBASIC14.94□□□□□ -0.02
CHRNB1P11230 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB1P11230 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.94□□□□□ -0.02
CHRNB1P11230 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC14.94□□□□□ -0.02
CHRNB1P11230 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CHRNB1P11230 AC023090.2-201ENST00000625182 2110 ntBASIC14.94□□□□□ -0.02
CHRNB1P11230 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.94□□□□□ -0.02
CHRNB1P11230 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB1P11230 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.94□□□□□ -0.02
CHRNB1P11230 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.94□□□□□ -0.02
CHRNB1P11230 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB1P11230 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB1P11230 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB1P11230 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB1P11230 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB1P11230 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB1P11230 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB1P11230 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.94□□□□□ -0.02
CHRNB1P11230 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB1P11230 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB1P11230 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB1P11230 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB1P11230 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB1P11230 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB1P11230 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNB1P11230 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB1P11230 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.93□□□□□ -0.02
CHRNB1P11230 KRT18P9-201ENST00000604826 1300 ntBASIC14.93□□□□□ -0.02
CHRNB1P11230 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB1P11230 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB1P11230 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CHRNB1P11230 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
CHRNB1P11230 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.93□□□□□ -0.02
CHRNB1P11230 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
CHRNB1P11230 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB1P11230 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB1P11230 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB1P11230 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB1P11230 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
CHRNB1P11230 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC14.93□□□□□ -0.02
CHRNB1P11230 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CHRNB1P11230 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB1P11230 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CHRNB1P11230 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB1P11230 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB1P11230 AL627422.1-201ENST00000434104 580 ntBASIC14.93□□□□□ -0.02
CHRNB1P11230 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC14.93□□□□□ -0.02
CHRNB1P11230 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC14.93□□□□□ -0.02
CHRNB1P11230 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.93□□□□□ -0.02
CHRNB1P11230 CHCHD2P9-201ENST00000461726 456 ntBASIC14.93□□□□□ -0.02
CHRNB1P11230 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.93□□□□□ -0.02
CHRNB1P11230 RBM8B-201ENST00000555532 525 ntBASIC14.93□□□□□ -0.02
CHRNB1P11230 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
CHRNB1P11230 MIR4522-201ENST00000584932 87 ntBASIC14.93□□□□□ -0.02
CHRNB1P11230 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB1P11230 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.93□□□□□ -0.02
CHRNB1P11230 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB1P11230 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CHRNB1P11230 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB1P11230 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB1P11230 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB1P11230 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.93□□□□□ -0.02
CHRNB1P11230 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB1P11230 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CHRNB1P11230 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB1P11230 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CHRNB1P11230 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNB1P11230 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms