RNA–Protein interactions for RNA: ENST00000393438.6

RUFY1-202, Transcript of RUN and FYVE domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUFY1, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY1-202ENST00000393438 NISCHQ9Y2I1 1504 aa27.95■■■□□ 2.06
RUFY1-202ENST00000393438 PELP1Q8IZL8 1130 aaKnown RBP25.58■■□□□ 1.69
RUFY1-202ENST00000393438 MYT1Q01538 1121 aa25.43■■□□□ 1.66
RUFY1-202ENST00000393438 TTBK1Q5TCY1 1321 aaPredicted RBP24.71■■□□□ 1.55
RUFY1-202ENST00000393438 CCDC180Q9P1Z9 1646 aa24.36■■□□□ 1.49
RUFY1-202ENST00000393438 SLC24A1O60721 1099 aa24.35■■□□□ 1.49
RUFY1-202ENST00000393438 PRKCSHP14314 528 aaPredicted RBP24.08■■□□□ 1.45
RUFY1-202ENST00000393438 APLP2Q06481 763 aa23.72■■□□□ 1.39
RUFY1-202ENST00000393438 ERICH6Q7L0X2 663 aa23.72■■□□□ 1.39
RUFY1-202ENST00000393438 ZCCHC6Q5VYS8 1495 aaKnown RBP23.45■■□□□ 1.35
RUFY1-202ENST00000393438 DCAF8L2P0C7V8 631 aa23.22■■□□□ 1.31
RUFY1-202ENST00000393438 DAXXQ9UER7 740 aaPredicted RBP23.12■■□□□ 1.29
RUFY1-202ENST00000393438 ABCC9O60706 1549 aa23.11■■□□□ 1.29
RUFY1-202ENST00000393438 DCAF1Q9Y4B6 1507 aa23.05■■□□□ 1.28
RUFY1-202ENST00000393438 BCL11AQ9H165 835 aa23.03■■□□□ 1.28
RUFY1-202ENST00000393438 SHROOM4Q9ULL8 1493 aa22.9■■□□□ 1.26
RUFY1-202ENST00000393438 MYO15BQ96JP2 1530 aa22.77■■□□□ 1.24
RUFY1-202ENST00000393438 NACADO15069 1562 aa22.69■■□□□ 1.22
RUFY1-202ENST00000393438 FAM9AQ8IZU1 332 aaPredicted RBP22.66■■□□□ 1.22
RUFY1-202ENST00000393438 HRCP23327 699 aa22.59■■□□□ 1.21
RUFY1-202ENST00000393438 SCAF1Q9H7N4 1312 aaKnown RBP22.53■■□□□ 1.2
RUFY1-202ENST00000393438 RB1CC1Q8TDY2 1594 aa22.51■■□□□ 1.19
RUFY1-202ENST00000393438 SCRIBQ14160 1630 aa22.46■■□□□ 1.19
RUFY1-202ENST00000393438 EIF5BO60841 1220 aaKnown RBP22.31■■□□□ 1.16
RUFY1-202ENST00000393438 UNC13AQ9UPW8 1703 aa22.15■■□□□ 1.14
RUFY1-202ENST00000393438 SUPT5HO00267 1087 aaKnown RBP22.04■■□□□ 1.12
RUFY1-202ENST00000393438 CENPBP07199 599 aaPredicted RBP22.03■■□□□ 1.12
RUFY1-202ENST00000393438 BICRAQ9NZM4 1560 aa21.84■■□□□ 1.09
RUFY1-202ENST00000393438 PABPN1Q86U42 306 aaKnown RBP eCLIP21.82■■□□□ 1.08
RUFY1-202ENST00000393438 CECR2Q9BXF3 1484 aa21.75■■□□□ 1.07
RUFY1-202ENST00000393438 PLEKHG5O94827 1062 aa21.71■■□□□ 1.07
RUFY1-202ENST00000393438 RSF1Q96T23 1441 aaPredicted RBP21.69■■□□□ 1.06
RUFY1-202ENST00000393438 PPARGC1BQ86YN6 1023 aaKnown RBP21.67■■□□□ 1.06
RUFY1-202ENST00000393438 MROH2BQ7Z745 1585 aa21.62■■□□□ 1.05
RUFY1-202ENST00000393438 BAZ1AQ9NRL2 1556 aaPredicted RBP21.57■■□□□ 1.04
RUFY1-202ENST00000393438 UBE2Q2Q8WVN8 375 aa21.56■■□□□ 1.04
RUFY1-202ENST00000393438 NCBP3Q53F19 620 aaKnown RBP21.55■■□□□ 1.04
RUFY1-202ENST00000393438 ANP32EQ9BTT0 268 aa21.52■■□□□ 1.04
RUFY1-202ENST00000393438 SMARCA4P51532 1647 aa21.5■■□□□ 1.03
RUFY1-202ENST00000393438 WIZO95785 1651 aa21.48■■□□□ 1.03
RUFY1-202ENST00000393438 ACIN1Q9UKV3 1341 aaKnown RBP21.38■■□□□ 1.01
RUFY1-202ENST00000393438 PODXL2Q9NZ53 605 aa21.37■■□□□ 1.01
RUFY1-202ENST00000393438 CSRNP3Q8WYN3 585 aa21.21■□□□□ 0.99
RUFY1-202ENST00000393438 ANO8Q9HCE9 1232 aaPredicted RBP21.2■□□□□ 0.98
RUFY1-202ENST00000393438 PEG3Q9GZU2 1588 aa21.19■□□□□ 0.98
RUFY1-202ENST00000393438 GTF3C3Q9Y5Q9 886 aa21.19■□□□□ 0.98
RUFY1-202ENST00000393438 TOP2AP11388 1531 aaKnown RBP21.19■□□□□ 0.98
RUFY1-202ENST00000393438 EIF4G1Q04637 1599 aaKnown RBP21.19■□□□□ 0.98
RUFY1-202ENST00000393438 CHIC1Q5VXU3 224 aa21.17■□□□□ 0.98
RUFY1-202ENST00000393438 ARXQ96QS3 562 aa21.16■□□□□ 0.98
RUFY1-202ENST00000393438 ATAD2BQ9ULI0 1458 aa21.13■□□□□ 0.97
RUFY1-202ENST00000393438 SMARCA2P51531 1590 aa21.11■□□□□ 0.97
RUFY1-202ENST00000393438 RANGAP1P46060 587 aaPredicted RBP21.09■□□□□ 0.97
RUFY1-202ENST00000393438 PKNOX2Q96KN3 472 aa21.07■□□□□ 0.96
RUFY1-202ENST00000393438 NEUROD1Q13562 356 aa21.05■□□□□ 0.96
RUFY1-202ENST00000393438 BAZ1BQ9UIG0 1483 aaKnown RBP21.03■□□□□ 0.96
RUFY1-202ENST00000393438 CCDC88BA6NC98 1476 aa21■□□□□ 0.95
RUFY1-202ENST00000393438 KLHL34Q8N239 644 aa20.99■□□□□ 0.95
RUFY1-202ENST00000393438 NCAPD3P42695 1498 aa20.93■□□□□ 0.94
RUFY1-202ENST00000393438 CC2D2AQ9P2K1 1620 aa20.9■□□□□ 0.94
RUFY1-202ENST00000393438 HMGXB3Q12766 1538 aa20.9■□□□□ 0.94
RUFY1-202ENST00000393438 PLPPR3Q6T4P5 718 aa20.8■□□□□ 0.92
RUFY1-202ENST00000393438 ZEB1P37275 1124 aaPredicted RBP20.79■□□□□ 0.92
RUFY1-202ENST00000393438 RTN4Q9NQC3 1192 aaKnown RBP20.78■□□□□ 0.92
RUFY1-202ENST00000393438 TIMELESSQ9UNS1 1208 aa20.76■□□□□ 0.91
RUFY1-202ENST00000393438 PCGF6Q9BYE7 350 aa20.75■□□□□ 0.91
RUFY1-202ENST00000393438 PDIA4P13667 645 aaKnown RBP20.69■□□□□ 0.9
RUFY1-202ENST00000393438 TRIM41Q8WV44 630 aa20.69■□□□□ 0.9
RUFY1-202ENST00000393438 NEFLP07196 543 aa20.68■□□□□ 0.9
RUFY1-202ENST00000393438 SALL2Q9Y467 1007 aaPredicted RBP20.63■□□□□ 0.89
RUFY1-202ENST00000393438 ABCC8Q09428 1581 aa20.6■□□□□ 0.89
RUFY1-202ENST00000393438 PDE4CQ08493 712 aa20.59■□□□□ 0.89
RUFY1-202ENST00000393438 ERICH6BQ5W0A0 696 aa20.58■□□□□ 0.88
RUFY1-202ENST00000393438 LOC105371045A0A1W2PR82 267 aa20.57■□□□□ 0.88
RUFY1-202ENST00000393438 CCDC136Q96JN2 1154 aa20.49■□□□□ 0.87
RUFY1-202ENST00000393438 CFTRP13569 1480 aa20.48■□□□□ 0.87
RUFY1-202ENST00000393438 EHMT2Q96KQ7 1210 aa20.45■□□□□ 0.86
RUFY1-202ENST00000393438 PRDM2Q13029 1718 aa20.43■□□□□ 0.86
RUFY1-202ENST00000393438 CADPSQ9ULU8 1353 aa20.42■□□□□ 0.86
RUFY1-202ENST00000393438 DNAJC5BQ9UF47 199 aa20.42■□□□□ 0.86
RUFY1-202ENST00000393438 WRNQ14191 1432 aaPredicted RBP eCLIP20.42■□□□□ 0.86
RUFY1-202ENST00000393438 AEBP2Q6ZN18 517 aaPredicted RBP20.39■□□□□ 0.86
RUFY1-202ENST00000393438 HOMEZQ8IX15 550 aa20.38■□□□□ 0.85
RUFY1-202ENST00000393438 SYNJ1O43426 1573 aa20.35■□□□□ 0.85
RUFY1-202ENST00000393438 TULP1O00294 542 aaPredicted RBP20.31■□□□□ 0.84
RUFY1-202ENST00000393438 FGD1P98174 961 aa20.31■□□□□ 0.84
RUFY1-202ENST00000393438 MYT1LQ9UL68 1186 aa20.3■□□□□ 0.84
RUFY1-202ENST00000393438 NESP48681 1621 aa20.29■□□□□ 0.84
RUFY1-202ENST00000393438 TOP2BQ02880 1626 aa20.25■□□□□ 0.83
RUFY1-202ENST00000393438 LAMC3Q9Y6N6 1575 aa20.24■□□□□ 0.83
RUFY1-202ENST00000393438 TSHZ2Q9NRE2 1034 aa20.24■□□□□ 0.83
RUFY1-202ENST00000393438 BIVM-ERCC5R4GMW8 1640 aa20.23■□□□□ 0.83
RUFY1-202ENST00000393438 BCL11BQ9C0K0 894 aaPredicted RBP20.21■□□□□ 0.83
RUFY1-202ENST00000393438 CUX1P39880 1505 aa20.21■□□□□ 0.83
RUFY1-202ENST00000393438 FANCD2Q9BXW9 1451 aa20.21■□□□□ 0.83
RUFY1-202ENST00000393438 TAF7LQ5H9L4 462 aa20.19■□□□□ 0.82
RUFY1-202ENST00000393438 SOGA1O94964 1423 aa20.19■□□□□ 0.82
RUFY1-202ENST00000393438 TRIM26Q12899 539 aaPredicted RBP20.16■□□□□ 0.82
RUFY1-202ENST00000393438 RUSC2Q8N2Y8 1516 aa20.14■□□□□ 0.81
RUFY1-202ENST00000393438 EEA1Q15075 1411 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms