RNA–Protein interactions for RNA: ENST00000379491.4

GCM2-201, Transcript of glial cells missing homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCM2, Length 2,441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCM2-201ENST00000379491 NISCHQ9Y2I1 1504 aa30.75■■■□□ 2.51
GCM2-201ENST00000379491 CCDC180Q9P1Z9 1646 aa26.7■■□□□ 1.87
GCM2-201ENST00000379491 DCAF8L2P0C7V8 631 aa25.8■■□□□ 1.72
GCM2-201ENST00000379491 ZCCHC6Q5VYS8 1495 aaKnown RBP25.77■■□□□ 1.72
GCM2-201ENST00000379491 ABCC9O60706 1549 aa25.74■■□□□ 1.71
GCM2-201ENST00000379491 PELP1Q8IZL8 1130 aaKnown RBP25.57■■□□□ 1.68
GCM2-201ENST00000379491 SHROOM4Q9ULL8 1493 aa25.41■■□□□ 1.66
GCM2-201ENST00000379491 MYT1Q01538 1121 aa25.41■■□□□ 1.66
GCM2-201ENST00000379491 DCAF1Q9Y4B6 1507 aa25.25■■□□□ 1.63
GCM2-201ENST00000379491 MYO15BQ96JP2 1530 aa24.98■■□□□ 1.59
GCM2-201ENST00000379491 NACADO15069 1562 aa24.98■■□□□ 1.59
GCM2-201ENST00000379491 RB1CC1Q8TDY2 1594 aa24.83■■□□□ 1.56
GCM2-201ENST00000379491 SCRIBQ14160 1630 aa24.8■■□□□ 1.56
GCM2-201ENST00000379491 TTBK1Q5TCY1 1321 aaPredicted RBP24.65■■□□□ 1.54
GCM2-201ENST00000379491 SUPT5HO00267 1087 aaKnown RBP24.65■■□□□ 1.54
GCM2-201ENST00000379491 UNC13AQ9UPW8 1703 aa24.38■■□□□ 1.49
GCM2-201ENST00000379491 PABPN1Q86U42 306 aaKnown RBP eCLIP24.37■■□□□ 1.49
GCM2-201ENST00000379491 BICRAQ9NZM4 1560 aa24.18■■□□□ 1.46
GCM2-201ENST00000379491 CECR2Q9BXF3 1484 aa24.06■■□□□ 1.44
GCM2-201ENST00000379491 RSF1Q96T23 1441 aaPredicted RBP23.87■■□□□ 1.41
GCM2-201ENST00000379491 MROH2BQ7Z745 1585 aa23.84■■□□□ 1.41
GCM2-201ENST00000379491 BAZ1AQ9NRL2 1556 aaPredicted RBP23.7■■□□□ 1.38
GCM2-201ENST00000379491 CHIC1Q5VXU3 224 aa23.69■■□□□ 1.38
GCM2-201ENST00000379491 SLC24A1O60721 1099 aa23.69■■□□□ 1.38
GCM2-201ENST00000379491 SMARCA4P51532 1647 aa23.65■■□□□ 1.38
GCM2-201ENST00000379491 WIZO95785 1651 aa23.63■■□□□ 1.37
GCM2-201ENST00000379491 PRKCSHP14314 528 aaPredicted RBP23.62■■□□□ 1.37
GCM2-201ENST00000379491 ERICH6Q7L0X2 663 aa23.48■■□□□ 1.35
GCM2-201ENST00000379491 HRCP23327 699 aa23.46■■□□□ 1.35
GCM2-201ENST00000379491 EIF4G1Q04637 1599 aaKnown RBP23.46■■□□□ 1.35
GCM2-201ENST00000379491 APLP2Q06481 763 aa23.38■■□□□ 1.33
GCM2-201ENST00000379491 ATAD2BQ9ULI0 1458 aa23.36■■□□□ 1.33
GCM2-201ENST00000379491 PEG3Q9GZU2 1588 aa23.28■■□□□ 1.32
GCM2-201ENST00000379491 TOP2AP11388 1531 aaKnown RBP23.26■■□□□ 1.31
GCM2-201ENST00000379491 SMARCA2P51531 1590 aa23.23■■□□□ 1.31
GCM2-201ENST00000379491 BAZ1BQ9UIG0 1483 aaKnown RBP23.21■■□□□ 1.31
GCM2-201ENST00000379491 CC2D2AQ9P2K1 1620 aa23.18■■□□□ 1.3
GCM2-201ENST00000379491 CCDC88BA6NC98 1476 aa23.14■■□□□ 1.3
GCM2-201ENST00000379491 NCAPD3P42695 1498 aa23.13■■□□□ 1.29
GCM2-201ENST00000379491 LOC105371045A0A1W2PR82 267 aa23.04■■□□□ 1.28
GCM2-201ENST00000379491 DNAJC5BQ9UF47 199 aa23.01■■□□□ 1.27
GCM2-201ENST00000379491 HMGXB3Q12766 1538 aa23■■□□□ 1.27
GCM2-201ENST00000379491 TRIM41Q8WV44 630 aa22.94■■□□□ 1.26
GCM2-201ENST00000379491 SCAF1Q9H7N4 1312 aaKnown RBP22.92■■□□□ 1.26
GCM2-201ENST00000379491 FAM9AQ8IZU1 332 aaPredicted RBP22.82■■□□□ 1.24
GCM2-201ENST00000379491 BCL11AQ9H165 835 aa22.79■■□□□ 1.24
GCM2-201ENST00000379491 EHMT2Q96KQ7 1210 aa22.7■■□□□ 1.22
GCM2-201ENST00000379491 DAXXQ9UER7 740 aaPredicted RBP22.67■■□□□ 1.22
GCM2-201ENST00000379491 ABCC8Q09428 1581 aa22.67■■□□□ 1.22
GCM2-201ENST00000379491 PPARGC1BQ86YN6 1023 aaKnown RBP22.6■■□□□ 1.21
GCM2-201ENST00000379491 CFTRP13569 1480 aa22.59■■□□□ 1.21
GCM2-201ENST00000379491 CADPSQ9ULU8 1353 aa22.59■■□□□ 1.21
GCM2-201ENST00000379491 NESP48681 1621 aa22.57■■□□□ 1.2
GCM2-201ENST00000379491 WRNQ14191 1432 aaPredicted RBP eCLIP22.44■■□□□ 1.18
GCM2-201ENST00000379491 PCGF6Q9BYE7 350 aa22.44■■□□□ 1.18
GCM2-201ENST00000379491 SYNJ1O43426 1573 aa22.38■■□□□ 1.17
GCM2-201ENST00000379491 FANCD2Q9BXW9 1451 aa22.34■■□□□ 1.17
GCM2-201ENST00000379491 LAMC3Q9Y6N6 1575 aa22.31■■□□□ 1.16
GCM2-201ENST00000379491 PRDM2Q13029 1718 aa22.29■■□□□ 1.16
GCM2-201ENST00000379491 SOGA1O94964 1423 aa22.29■■□□□ 1.16
GCM2-201ENST00000379491 CUX1P39880 1505 aa22.27■■□□□ 1.16
GCM2-201ENST00000379491 RUSC2Q8N2Y8 1516 aa22.24■■□□□ 1.15
GCM2-201ENST00000379491 PDS5BQ9NTI5 1447 aa22.2■■□□□ 1.15
GCM2-201ENST00000379491 TOP2BQ02880 1626 aa22.2■■□□□ 1.14
GCM2-201ENST00000379491 CEP164Q9UPV0 1460 aa22.17■■□□□ 1.14
GCM2-201ENST00000379491 KIF21AQ7Z4S6 1674 aa22.16■■□□□ 1.14
GCM2-201ENST00000379491 BIVM-ERCC5R4GMW8 1640 aa22.14■■□□□ 1.13
GCM2-201ENST00000379491 CENPBP07199 599 aaPredicted RBP22.1■■□□□ 1.13
GCM2-201ENST00000379491 URB2Q14146 1524 aaKnown RBP22.09■■□□□ 1.13
GCM2-201ENST00000379491 TOPBP1Q92547 1522 aa22.07■■□□□ 1.12
GCM2-201ENST00000379491 FGD5Q6ZNL6 1462 aa22.06■■□□□ 1.12
GCM2-201ENST00000379491 TRIM26Q12899 539 aaPredicted RBP22.05■■□□□ 1.12
GCM2-201ENST00000379491 CSRNP3Q8WYN3 585 aa22.05■■□□□ 1.12
GCM2-201ENST00000379491 DNMBPQ6XZF7 1577 aa22.02■■□□□ 1.12
GCM2-201ENST00000379491 ERCC6Q03468 1493 aa22.02■■□□□ 1.11
GCM2-201ENST00000379491 RAD54L2Q9Y4B4 1467 aa22■■□□□ 1.11
GCM2-201ENST00000379491 ACIN1Q9UKV3 1341 aaKnown RBP21.98■■□□□ 1.11
GCM2-201ENST00000379491 POLA1P09884 1462 aaPredicted RBP21.97■■□□□ 1.11
GCM2-201ENST00000379491 MRC2Q9UBG0 1479 aa21.93■■□□□ 1.1
GCM2-201ENST00000379491 UBTFP17480 764 aaKnown RBP21.93■■□□□ 1.1
GCM2-201ENST00000379491 EEA1Q15075 1411 aa21.92■■□□□ 1.1
GCM2-201ENST00000379491 EIF5BO60841 1220 aaKnown RBP21.92■■□□□ 1.1
GCM2-201ENST00000379491 CUX2O14529 1486 aa21.91■■□□□ 1.1
GCM2-201ENST00000379491 CEP162Q5TB80 1403 aa21.88■■□□□ 1.09
GCM2-201ENST00000379491 KIF27Q86VH2 1401 aa21.86■■□□□ 1.09
GCM2-201ENST00000379491 TNIKQ9UKE5 1360 aa21.85■■□□□ 1.09
GCM2-201ENST00000379491 TDRD9Q8NDG6 1382 aaKnown RBP21.82■■□□□ 1.08
GCM2-201ENST00000379491 GOLGA3Q08378 1498 aa21.81■■□□□ 1.08
GCM2-201ENST00000379491 WDR62O43379 1518 aa21.8■■□□□ 1.08
GCM2-201ENST00000379491 THOC2Q8NI27 1593 aaKnown RBP21.79■■□□□ 1.08
GCM2-201ENST00000379491 ABCA10Q8WWZ4 1543 aa21.78■■□□□ 1.08
GCM2-201ENST00000379491 IGF1RP08069 1367 aa21.76■■□□□ 1.07
GCM2-201ENST00000379491 GTF3C3Q9Y5Q9 886 aa21.76■■□□□ 1.07
GCM2-201ENST00000379491 RAPGEF2Q9Y4G8 1499 aa21.75■■□□□ 1.07
GCM2-201ENST00000379491 RANGAP1P46060 587 aaPredicted RBP21.74■■□□□ 1.07
GCM2-201ENST00000379491 NEUROD1Q13562 356 aa21.72■■□□□ 1.07
GCM2-201ENST00000379491 TARBP1Q13395 1621 aaKnown RBP21.72■■□□□ 1.07
GCM2-201ENST00000379491 KIF21BO75037 1637 aa21.71■■□□□ 1.07
GCM2-201ENST00000379491 AQRO60306 1485 aaKnown RBP eCLIP21.7■■□□□ 1.06
GCM2-201ENST00000379491 ZEB1P37275 1124 aaPredicted RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms