Protein–RNA interactions for Protein: A6NEF3

GOLGA6L4, Golgin subfamily A member 6-like protein 4, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GOLGA6L4A6NEF3 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 AC016397.2-201ENST00000624848 1985 ntBASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 AC241585.1-201ENST00000433527 519 ntBASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 RPL13AP25-201ENST00000484130 612 ntBASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 AC015911.4-201ENST00000588022 1070 ntBASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 AC093813.1-201ENST00000605066 256 ntBASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 BX539320.1-201ENST00000623759 877 ntBASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 AC079781.4-201ENST00000641908 219 ntBASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 STK40-201ENST00000359297 4837 ntTSL 2 BASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GOLGA6L4A6NEF3 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
GOLGA6L4A6NEF3 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC17.14■□□□□ 0.33
GOLGA6L4A6NEF3 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GOLGA6L4A6NEF3 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GOLGA6L4A6NEF3 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
GOLGA6L4A6NEF3 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
GOLGA6L4A6NEF3 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
GOLGA6L4A6NEF3 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
GOLGA6L4A6NEF3 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GOLGA6L4A6NEF3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GOLGA6L4A6NEF3 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.14■□□□□ 0.33
GOLGA6L4A6NEF3 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.14■□□□□ 0.33
GOLGA6L4A6NEF3 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
GOLGA6L4A6NEF3 AC135586.1-201ENST00000539323 574 ntBASIC17.14■□□□□ 0.33
GOLGA6L4A6NEF3 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.14■□□□□ 0.33
GOLGA6L4A6NEF3 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
GOLGA6L4A6NEF3 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.14■□□□□ 0.33
GOLGA6L4A6NEF3 SRD5A3P1-201ENST00000603021 949 ntBASIC17.14■□□□□ 0.33
GOLGA6L4A6NEF3 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
GOLGA6L4A6NEF3 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
GOLGA6L4A6NEF3 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GOLGA6L4A6NEF3 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GOLGA6L4A6NEF3 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
GOLGA6L4A6NEF3 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
GOLGA6L4A6NEF3 AC012617.1-204ENST00000586340 2305 ntBASIC17.14■□□□□ 0.33
GOLGA6L4A6NEF3 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
GOLGA6L4A6NEF3 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
GOLGA6L4A6NEF3 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
GOLGA6L4A6NEF3 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC17.14■□□□□ 0.33
GOLGA6L4A6NEF3 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
GOLGA6L4A6NEF3 ADK-205ENST00000539909 1866 ntTSL 2 BASIC17.14■□□□□ 0.33
GOLGA6L4A6NEF3 INE2-201ENST00000630399 1874 ntBASIC17.14■□□□□ 0.33
GOLGA6L4A6NEF3 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GOLGA6L4A6NEF3 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
GOLGA6L4A6NEF3 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GOLGA6L4A6NEF3 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
GOLGA6L4A6NEF3 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
GOLGA6L4A6NEF3 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GOLGA6L4A6NEF3 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GOLGA6L4A6NEF3 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GOLGA6L4A6NEF3 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GOLGA6L4A6NEF3 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GOLGA6L4A6NEF3 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GOLGA6L4A6NEF3 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC17.13■□□□□ 0.33
GOLGA6L4A6NEF3 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
GOLGA6L4A6NEF3 AC090505.1-201ENST00000430515 1834 ntBASIC17.13■□□□□ 0.33
GOLGA6L4A6NEF3 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC17.13■□□□□ 0.33
GOLGA6L4A6NEF3 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GOLGA6L4A6NEF3 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
GOLGA6L4A6NEF3 MIR943-201ENST00000401286 94 ntBASIC17.13■□□□□ 0.33
GOLGA6L4A6NEF3 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.13■□□□□ 0.33
GOLGA6L4A6NEF3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.13■□□□□ 0.33
GOLGA6L4A6NEF3 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GOLGA6L4A6NEF3 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GOLGA6L4A6NEF3 AL589987.1-201ENST00000453380 819 ntBASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms