RNA–Protein interactions for RNA: ENST00000350881.6

THBS4-201, Transcript of thrombospondin 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene THBS4, Length 3,222 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4-201ENST00000350881 NISCHQ9Y2I1 1504 aa28.41■■■□□ 2.14
THBS4-201ENST00000350881 SHROOM4Q9ULL8 1493 aa25.83■■□□□ 1.72
THBS4-201ENST00000350881 DCAF8L2P0C7V8 631 aa25.52■■□□□ 1.68
THBS4-201ENST00000350881 SUPT5HO00267 1087 aaKnown RBP25.4■■□□□ 1.66
THBS4-201ENST00000350881 EHMT2Q96KQ7 1210 aa24.11■■□□□ 1.45
THBS4-201ENST00000350881 CHIC1Q5VXU3 224 aa23.98■■□□□ 1.43
THBS4-201ENST00000350881 HRCP23327 699 aa23.93■■□□□ 1.42
THBS4-201ENST00000350881 PPARGC1BQ86YN6 1023 aaKnown RBP23.92■■□□□ 1.42
THBS4-201ENST00000350881 PCGF6Q9BYE7 350 aa23.89■■□□□ 1.41
THBS4-201ENST00000350881 LOC105371045A0A1W2PR82 267 aa23.88■■□□□ 1.41
THBS4-201ENST00000350881 ZCCHC6Q5VYS8 1495 aaKnown RBP23.87■■□□□ 1.41
THBS4-201ENST00000350881 MYO15BQ96JP2 1530 aa23.79■■□□□ 1.4
THBS4-201ENST00000350881 FAM9AQ8IZU1 332 aaPredicted RBP23.73■■□□□ 1.39
THBS4-201ENST00000350881 CCDC180Q9P1Z9 1646 aa23.41■■□□□ 1.34
THBS4-201ENST00000350881 TRIM41Q8WV44 630 aa23.21■■□□□ 1.31
THBS4-201ENST00000350881 ABCC9O60706 1549 aa23.21■■□□□ 1.31
THBS4-201ENST00000350881 TTBK1Q5TCY1 1321 aaPredicted RBP23.2■■□□□ 1.3
THBS4-201ENST00000350881 PELP1Q8IZL8 1130 aaKnown RBP23.17■■□□□ 1.3
THBS4-201ENST00000350881 SCRIBQ14160 1630 aa23.09■■□□□ 1.29
THBS4-201ENST00000350881 SCAF1Q9H7N4 1312 aaKnown RBP22.94■■□□□ 1.26
THBS4-201ENST00000350881 RSF1Q96T23 1441 aaPredicted RBP22.79■■□□□ 1.24
THBS4-201ENST00000350881 TRIM26Q12899 539 aaPredicted RBP22.76■■□□□ 1.23
THBS4-201ENST00000350881 CECR2Q9BXF3 1484 aa22.7■■□□□ 1.22
THBS4-201ENST00000350881 PABPN1Q86U42 306 aaKnown RBP eCLIP22.7■■□□□ 1.22
THBS4-201ENST00000350881 RANGAP1P46060 587 aaPredicted RBP22.66■■□□□ 1.22
THBS4-201ENST00000350881 RB1CC1Q8TDY2 1594 aa22.59■■□□□ 1.21
THBS4-201ENST00000350881 DCAF1Q9Y4B6 1507 aa22.59■■□□□ 1.21
THBS4-201ENST00000350881 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.5■■□□□ 1.19
THBS4-201ENST00000350881 MROH2BQ7Z745 1585 aa22.4■■□□□ 1.18
THBS4-201ENST00000350881 UBTFP17480 764 aaKnown RBP22.34■■□□□ 1.17
THBS4-201ENST00000350881 CCER1Q8TC90 406 aaPredicted RBP22.31■■□□□ 1.16
THBS4-201ENST00000350881 NEUROD1Q13562 356 aa22.3■■□□□ 1.16
THBS4-201ENST00000350881 GTF3C3Q9Y5Q9 886 aa22.27■■□□□ 1.15
THBS4-201ENST00000350881 WIZO95785 1651 aa22.25■■□□□ 1.15
THBS4-201ENST00000350881 ZEB1P37275 1124 aaPredicted RBP22.25■■□□□ 1.15
THBS4-201ENST00000350881 ACIN1Q9UKV3 1341 aaKnown RBP22.21■■□□□ 1.15
THBS4-201ENST00000350881 MYT1Q01538 1121 aa22.2■■□□□ 1.14
THBS4-201ENST00000350881 ABCC8Q09428 1581 aa22.09■■□□□ 1.13
THBS4-201ENST00000350881 HNRNPUL2Q1KMD3 747 aaKnown RBP22.04■■□□□ 1.12
THBS4-201ENST00000350881 NACADO15069 1562 aa21.98■■□□□ 1.11
THBS4-201ENST00000350881 SOGA1O94964 1423 aa21.97■■□□□ 1.11
THBS4-201ENST00000350881 CCDC88BA6NC98 1476 aa21.97■■□□□ 1.11
THBS4-201ENST00000350881 YTHDC1Q96MU7 727 aaKnown RBP21.97■■□□□ 1.11
THBS4-201ENST00000350881 CENPBP07199 599 aaPredicted RBP21.95■■□□□ 1.1
THBS4-201ENST00000350881 RUSC2Q8N2Y8 1516 aa21.9■■□□□ 1.1
THBS4-201ENST00000350881 CSRNP3Q8WYN3 585 aa21.87■■□□□ 1.09
THBS4-201ENST00000350881 DIEXFQ68CQ4 756 aaKnown RBP21.84■■□□□ 1.09
THBS4-201ENST00000350881 BAZ1AQ9NRL2 1556 aaPredicted RBP21.73■■□□□ 1.07
THBS4-201ENST00000350881 ITGAEP38570 1179 aa21.72■■□□□ 1.07
THBS4-201ENST00000350881 APLP2Q06481 763 aa21.72■■□□□ 1.07
THBS4-201ENST00000350881 CEP162Q5TB80 1403 aa21.71■■□□□ 1.07
THBS4-201ENST00000350881 ATP1B4Q9UN42 357 aaPredicted RBP21.59■■□□□ 1.05
THBS4-201ENST00000350881 SMARCA4P51532 1647 aa21.56■■□□□ 1.04
THBS4-201ENST00000350881 SMARCA2P51531 1590 aa21.52■■□□□ 1.04
THBS4-201ENST00000350881 WRNQ14191 1432 aaPredicted RBP eCLIP21.51■■□□□ 1.03
THBS4-201ENST00000350881 TOP2AP11388 1531 aaKnown RBP21.5■■□□□ 1.03
THBS4-201ENST00000350881 P3H3Q8IVL6 736 aa21.43■■□□□ 1.02
THBS4-201ENST00000350881 TNIKQ9UKE5 1360 aa21.4■■□□□ 1.02
THBS4-201ENST00000350881 UNC13AQ9UPW8 1703 aa21.35■■□□□ 1.01
THBS4-201ENST00000350881 CLIP1P30622 1438 aa21.35■■□□□ 1.01
THBS4-201ENST00000350881 BAZ1BQ9UIG0 1483 aaKnown RBP21.31■■□□□ 1
THBS4-201ENST00000350881 MIER1Q8N108 512 aa21.31■■□□□ 1
THBS4-201ENST00000350881 GOLGA3Q08378 1498 aa21.29■■□□□ 1
THBS4-201ENST00000350881 ZNF316A6NFI3 1004 aaPredicted RBP21.29■■□□□ 1
THBS4-201ENST00000350881 KANK4Q5T7N3 995 aaPredicted RBP21.29■■□□□ 1
THBS4-201ENST00000350881 RAPGEF2Q9Y4G8 1499 aa21.28■■□□□ 1
THBS4-201ENST00000350881 EIF4G1Q04637 1599 aaKnown RBP21.27■■□□□ 1
THBS4-201ENST00000350881 BCL11AQ9H165 835 aa21.27■□□□□ 0.99
THBS4-201ENST00000350881 BICRAQ9NZM4 1560 aa21.24■□□□□ 0.99
THBS4-201ENST00000350881 SYNJ1O43426 1573 aa21.22■□□□□ 0.99
THBS4-201ENST00000350881 ATAD2BQ9ULI0 1458 aa21.22■□□□□ 0.99
THBS4-201ENST00000350881 FAM50AQ14320 339 aaKnown RBP21.11■□□□□ 0.97
THBS4-201ENST00000350881 HIRIP3Q9BW71 556 aaPredicted RBP21.11■□□□□ 0.97
THBS4-201ENST00000350881 CEP164Q9UPV0 1460 aa21.11■□□□□ 0.97
THBS4-201ENST00000350881 ARID3CA6NKF2 412 aa21.08■□□□□ 0.97
THBS4-201ENST00000350881 EEA1Q15075 1411 aa21.06■□□□□ 0.96
THBS4-201ENST00000350881 ANP32EQ9BTT0 268 aa21.02■□□□□ 0.96
THBS4-201ENST00000350881 VPS8Q8N3P4 1428 aa21■□□□□ 0.95
THBS4-201ENST00000350881 BCANQ96GW7 911 aa20.99■□□□□ 0.95
THBS4-201ENST00000350881 SUPT16HQ9Y5B9 1047 aaKnown RBP20.96■□□□□ 0.95
THBS4-201ENST00000350881 TSHZ2Q9NRE2 1034 aa20.93■□□□□ 0.94
THBS4-201ENST00000350881 SIN3AQ96ST3 1273 aa20.9■□□□□ 0.94
THBS4-201ENST00000350881 KCNH8Q96L42 1107 aa20.87■□□□□ 0.93
THBS4-201ENST00000350881 KIF21BO75037 1637 aa20.86■□□□□ 0.93
THBS4-201ENST00000350881 DNAJC5BQ9UF47 199 aa20.86■□□□□ 0.93
THBS4-201ENST00000350881 CNGB1Q14028 1251 aaPredicted RBP20.83■□□□□ 0.93
THBS4-201ENST00000350881 CUX2O14529 1486 aa20.81■□□□□ 0.92
THBS4-201ENST00000350881 ARAP1Q96P48 1450 aa20.81■□□□□ 0.92
THBS4-201ENST00000350881 KIF27Q86VH2 1401 aa20.79■□□□□ 0.92
THBS4-201ENST00000350881 DDX10Q13206 875 aaKnown RBP20.77■□□□□ 0.92
THBS4-201ENST00000350881 CUX1P39880 1505 aa20.74■□□□□ 0.91
THBS4-201ENST00000350881 DHX57Q6P158 1386 aaKnown RBP20.73■□□□□ 0.91
THBS4-201ENST00000350881 CHIC2Q9UKJ5 165 aa20.7■□□□□ 0.9
THBS4-201ENST00000350881 CARMIL1Q5VZK9 1371 aa20.67■□□□□ 0.9
THBS4-201ENST00000350881 CCNB3Q8WWL7 1395 aa20.66■□□□□ 0.9
THBS4-201ENST00000350881 IGF1RP08069 1367 aa20.64■□□□□ 0.89
THBS4-201ENST00000350881 PEG3Q9GZU2 1588 aa20.64■□□□□ 0.89
THBS4-201ENST00000350881 TOP2BQ02880 1626 aa20.63■□□□□ 0.89
THBS4-201ENST00000350881 PRXQ9BXM0 1461 aa20.62■□□□□ 0.89
THBS4-201ENST00000350881 RAD54L2Q9Y4B4 1467 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms