RNA–Protein interactions for RNA: ENST00000448456.3

CGB8-201, Transcript of chorionic gonadotropin subunit beta 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CGB8, Length 882 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGB8-201ENST00000448456 NISCHQ9Y2I1 1504 aa37.17■■■■□ 3.54
CGB8-201ENST00000448456 CCDC180Q9P1Z9 1646 aa32.91■■■□□ 2.86
CGB8-201ENST00000448456 ABCC9O60706 1549 aa32.28■■■□□ 2.76
CGB8-201ENST00000448456 DCAF8L2P0C7V8 631 aa31.34■■■□□ 2.61
CGB8-201ENST00000448456 RB1CC1Q8TDY2 1594 aa31.05■■■□□ 2.56
CGB8-201ENST00000448456 NACADO15069 1562 aa31.02■■■□□ 2.56
CGB8-201ENST00000448456 ZCCHC6Q5VYS8 1495 aaKnown RBP30.94■■■□□ 2.54
CGB8-201ENST00000448456 MYO15BQ96JP2 1530 aa30.82■■■□□ 2.52
CGB8-201ENST00000448456 DCAF1Q9Y4B6 1507 aa30.72■■■□□ 2.51
CGB8-201ENST00000448456 PABPN1Q86U42 306 aaKnown RBP eCLIP30.28■■■□□ 2.44
CGB8-201ENST00000448456 UNC13AQ9UPW8 1703 aa30.14■■■□□ 2.42
CGB8-201ENST00000448456 SCRIBQ14160 1630 aa30.12■■■□□ 2.41
CGB8-201ENST00000448456 BICRAQ9NZM4 1560 aa29.98■■■□□ 2.39
CGB8-201ENST00000448456 SHROOM4Q9ULL8 1493 aa29.75■■■□□ 2.35
CGB8-201ENST00000448456 DNAJC5BQ9UF47 199 aa29.54■■■□□ 2.32
CGB8-201ENST00000448456 EIF4G1Q04637 1599 aaKnown RBP29.26■■■□□ 2.28
CGB8-201ENST00000448456 CC2D2AQ9P2K1 1620 aa29.12■■■□□ 2.25
CGB8-201ENST00000448456 CECR2Q9BXF3 1484 aa29■■■□□ 2.23
CGB8-201ENST00000448456 BAZ1AQ9NRL2 1556 aaPredicted RBP28.83■■■□□ 2.21
CGB8-201ENST00000448456 SMARCA4P51532 1647 aa28.78■■■□□ 2.2
CGB8-201ENST00000448456 ATAD2BQ9ULI0 1458 aa28.66■■■□□ 2.18
CGB8-201ENST00000448456 SMARCA2P51531 1590 aa28.64■■■□□ 2.18
CGB8-201ENST00000448456 NCAPD3P42695 1498 aa28.64■■■□□ 2.17
CGB8-201ENST00000448456 MROH2BQ7Z745 1585 aa28.63■■■□□ 2.17
CGB8-201ENST00000448456 BAZ1BQ9UIG0 1483 aaKnown RBP28.47■■■□□ 2.15
CGB8-201ENST00000448456 PEG3Q9GZU2 1588 aa28.46■■■□□ 2.15
CGB8-201ENST00000448456 HMGXB3Q12766 1538 aa28.44■■■□□ 2.14
CGB8-201ENST00000448456 RSF1Q96T23 1441 aaPredicted RBP28.39■■■□□ 2.14
CGB8-201ENST00000448456 WIZO95785 1651 aa28.31■■■□□ 2.12
CGB8-201ENST00000448456 TOP2AP11388 1531 aaKnown RBP28.03■■■□□ 2.08
CGB8-201ENST00000448456 SUPT5HO00267 1087 aaKnown RBP27.94■■■□□ 2.06
CGB8-201ENST00000448456 NESP48681 1621 aa27.9■■■□□ 2.06
CGB8-201ENST00000448456 ERCC6Q03468 1493 aa27.89■■■□□ 2.05
CGB8-201ENST00000448456 CADPSQ9ULU8 1353 aa27.87■■■□□ 2.05
CGB8-201ENST00000448456 LAMC3Q9Y6N6 1575 aa27.84■■■□□ 2.05
CGB8-201ENST00000448456 PDS5BQ9NTI5 1447 aa27.77■■■□□ 2.04
CGB8-201ENST00000448456 CCDC88BA6NC98 1476 aa27.76■■■□□ 2.04
CGB8-201ENST00000448456 CFTRP13569 1480 aa27.66■■■□□ 2.02
CGB8-201ENST00000448456 FANCD2Q9BXW9 1451 aa27.52■■■□□ 2
CGB8-201ENST00000448456 KIF21AQ7Z4S6 1674 aa27.49■■□□□ 1.99
CGB8-201ENST00000448456 CEP164Q9UPV0 1460 aa27.48■■□□□ 1.99
CGB8-201ENST00000448456 CUX2O14529 1486 aa27.46■■□□□ 1.99
CGB8-201ENST00000448456 MRC2Q9UBG0 1479 aa27.41■■□□□ 1.98
CGB8-201ENST00000448456 THOC2Q8NI27 1593 aaKnown RBP27.37■■□□□ 1.97
CGB8-201ENST00000448456 PRDM2Q13029 1718 aa27.29■■□□□ 1.96
CGB8-201ENST00000448456 WDR62O43379 1518 aa27.25■■□□□ 1.95
CGB8-201ENST00000448456 URB2Q14146 1524 aaKnown RBP27.18■■□□□ 1.94
CGB8-201ENST00000448456 ABCC8Q09428 1581 aa27.13■■□□□ 1.93
CGB8-201ENST00000448456 TOPBP1Q92547 1522 aa27.06■■□□□ 1.92
CGB8-201ENST00000448456 DNMBPQ6XZF7 1577 aa27.01■■□□□ 1.92
CGB8-201ENST00000448456 IFT140Q96RY7 1462 aa26.91■■□□□ 1.9
CGB8-201ENST00000448456 CUX1P39880 1505 aa26.85■■□□□ 1.89
CGB8-201ENST00000448456 SOGA1O94964 1423 aa26.82■■□□□ 1.88
CGB8-201ENST00000448456 POLA1P09884 1462 aaPredicted RBP26.82■■□□□ 1.88
CGB8-201ENST00000448456 WRNQ14191 1432 aaPredicted RBP eCLIP26.81■■□□□ 1.88
CGB8-201ENST00000448456 FGD5Q6ZNL6 1462 aa26.8■■□□□ 1.88
CGB8-201ENST00000448456 RAD54L2Q9Y4B4 1467 aa26.74■■□□□ 1.87
CGB8-201ENST00000448456 ZNF608Q9ULD9 1512 aaPredicted RBP26.73■■□□□ 1.87
CGB8-201ENST00000448456 TARBP1Q13395 1621 aaKnown RBP26.68■■□□□ 1.86
CGB8-201ENST00000448456 AQRO60306 1485 aaKnown RBP eCLIP26.66■■□□□ 1.86
CGB8-201ENST00000448456 TDRD9Q8NDG6 1382 aaKnown RBP26.65■■□□□ 1.86
CGB8-201ENST00000448456 TOP2BQ02880 1626 aa26.64■■□□□ 1.85
CGB8-201ENST00000448456 SYNJ1O43426 1573 aa26.63■■□□□ 1.85
CGB8-201ENST00000448456 DNAJC5Q9H3Z4 198 aa26.6■■□□□ 1.85
CGB8-201ENST00000448456 BIVM-ERCC5R4GMW8 1640 aa26.59■■□□□ 1.85
CGB8-201ENST00000448456 EIF4G3O43432 1585 aaKnown RBP26.58■■□□□ 1.85
CGB8-201ENST00000448456 ABCA10Q8WWZ4 1543 aa26.52■■□□□ 1.84
CGB8-201ENST00000448456 OSCARQ8IYS5 282 aa26.51■■□□□ 1.83
CGB8-201ENST00000448456 WDR97A6NE52 1622 aa26.5■■□□□ 1.83
CGB8-201ENST00000448456 FBLN2P98095 1184 aa26.49■■□□□ 1.83
CGB8-201ENST00000448456 GAPVD1Q14C86 1478 aa26.48■■□□□ 1.83
CGB8-201ENST00000448456 GRIN2BQ13224 1484 aa26.45■■□□□ 1.82
CGB8-201ENST00000448456 CHMP7Q8WUX9 453 aaPredicted RBP26.4■■□□□ 1.82
CGB8-201ENST00000448456 TRIM41Q8WV44 630 aa26.4■■□□□ 1.82
CGB8-201ENST00000448456 SNAPC4Q5SXM2 1469 aa26.37■■□□□ 1.81
CGB8-201ENST00000448456 MAGI1Q96QZ7 1491 aaPredicted RBP26.35■■□□□ 1.81
CGB8-201ENST00000448456 ABCA5Q8WWZ7 1642 aa26.33■■□□□ 1.81
CGB8-201ENST00000448456 KIF27Q86VH2 1401 aa26.29■■□□□ 1.8
CGB8-201ENST00000448456 PBRM1Q86U86 1689 aa26.26■■□□□ 1.79
CGB8-201ENST00000448456 SYNJ2O15056 1496 aa26.25■■□□□ 1.79
CGB8-201ENST00000448456 ERICH3Q5RHP9 1530 aa26.21■■□□□ 1.79
CGB8-201ENST00000448456 CHD1O14646 1710 aa26.19■■□□□ 1.78
CGB8-201ENST00000448456 FHAD1B1AJZ9 1412 aa26.18■■□□□ 1.78
CGB8-201ENST00000448456 IGF1RP08069 1367 aa26.13■■□□□ 1.77
CGB8-201ENST00000448456 ADAMTS12P58397 1594 aa26.1■■□□□ 1.77
CGB8-201ENST00000448456 GRIN2AQ12879 1464 aa26.08■■□□□ 1.77
CGB8-201ENST00000448456 CHIC1Q5VXU3 224 aa26.04■■□□□ 1.76
CGB8-201ENST00000448456 CARMIL1Q5VZK9 1371 aa26.02■■□□□ 1.76
CGB8-201ENST00000448456 RUSC2Q8N2Y8 1516 aa25.98■■□□□ 1.75
CGB8-201ENST00000448456 CUL7Q14999 1698 aa25.96■■□□□ 1.75
CGB8-201ENST00000448456 NUP160Q12769 1436 aa25.93■■□□□ 1.74
CGB8-201ENST00000448456 CLASP1Q7Z460 1538 aa25.93■■□□□ 1.74
CGB8-201ENST00000448456 ARHGEF11O15085 1522 aa25.89■■□□□ 1.74
CGB8-201ENST00000448456 CEP170Q5SW79 1584 aa25.88■■□□□ 1.73
CGB8-201ENST00000448456 CSRNP3Q8WYN3 585 aa25.86■■□□□ 1.73
CGB8-201ENST00000448456 RIMBP3CA6NJZ7 1639 aa25.85■■□□□ 1.73
CGB8-201ENST00000448456 RIMBP3BA6NNM3 1639 aa25.85■■□□□ 1.73
CGB8-201ENST00000448456 RIMBP3Q9UFD9 1639 aa25.85■■□□□ 1.73
CGB8-201ENST00000448456 FAM9AQ8IZU1 332 aaPredicted RBP25.85■■□□□ 1.73
CGB8-201ENST00000448456 RAPGEF2Q9Y4G8 1499 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms