Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 AC018442.1-201ENST00000421439 2061 ntBASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 AC092580.3-201ENST00000430932 139 ntBASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PCDHGB4Q9UN71 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.44□□□□□ -0.1
PCDHGB4Q9UN71 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHGB4Q9UN71 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHGB4Q9UN71 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.44□□□□□ -0.1
PCDHGB4Q9UN71 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHGB4Q9UN71 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.44□□□□□ -0.1
PCDHGB4Q9UN71 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHGB4Q9UN71 AC023090.2-201ENST00000625182 2110 ntBASIC14.44□□□□□ -0.1
PCDHGB4Q9UN71 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHGB4Q9UN71 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.44□□□□□ -0.1
PCDHGB4Q9UN71 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
PCDHGB4Q9UN71 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.44□□□□□ -0.1
PCDHGB4Q9UN71 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC14.44□□□□□ -0.1
PCDHGB4Q9UN71 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
PCDHGB4Q9UN71 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.44□□□□□ -0.1
PCDHGB4Q9UN71 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHGB4Q9UN71 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
PCDHGB4Q9UN71 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.44□□□□□ -0.1
PCDHGB4Q9UN71 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHGB4Q9UN71 AC006538.3-201ENST00000612495 578 ntBASIC14.44□□□□□ -0.1
PCDHGB4Q9UN71 AC093028.1-201ENST00000622998 982 ntBASIC14.44□□□□□ -0.1
PCDHGB4Q9UN71 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHGB4Q9UN71 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHGB4Q9UN71 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.44□□□□□ -0.1
PCDHGB4Q9UN71 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHGB4Q9UN71 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PCDHGB4Q9UN71 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC14.44□□□□□ -0.1
PCDHGB4Q9UN71 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.44□□□□□ -0.1
PCDHGB4Q9UN71 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHGB4Q9UN71 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.44□□□□□ -0.1
PCDHGB4Q9UN71 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHGB4Q9UN71 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHGB4Q9UN71 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGB4Q9UN71 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.43□□□□□ -0.1
PCDHGB4Q9UN71 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGB4Q9UN71 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGB4Q9UN71 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGB4Q9UN71 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGB4Q9UN71 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.43□□□□□ -0.1
PCDHGB4Q9UN71 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGB4Q9UN71 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGB4Q9UN71 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.43□□□□□ -0.1
PCDHGB4Q9UN71 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGB4Q9UN71 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
PCDHGB4Q9UN71 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.43□□□□□ -0.1
PCDHGB4Q9UN71 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGB4Q9UN71 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.43□□□□□ -0.1
PCDHGB4Q9UN71 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGB4Q9UN71 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGB4Q9UN71 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.43□□□□□ -0.1
PCDHGB4Q9UN71 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.43□□□□□ -0.1
PCDHGB4Q9UN71 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.43□□□□□ -0.1
PCDHGB4Q9UN71 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.43□□□□□ -0.1
PCDHGB4Q9UN71 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.43□□□□□ -0.1
PCDHGB4Q9UN71 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms