RNA–Protein interactions for RNA: ENST00000344642.6

LDLRAD2-201, Transcript of low density lipoprotein receptor class A domain containing 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LDLRAD2, Length 4,012 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD2-201ENST00000344642 NISCHQ9Y2I1 1504 aa25.29■■□□□ 1.64
LDLRAD2-201ENST00000344642 SUPT5HO00267 1087 aaKnown RBP23.27■■□□□ 1.32
LDLRAD2-201ENST00000344642 SHROOM4Q9ULL8 1493 aa23.26■■□□□ 1.31
LDLRAD2-201ENST00000344642 PPARGC1BQ86YN6 1023 aaKnown RBP23.22■■□□□ 1.31
LDLRAD2-201ENST00000344642 HRCP23327 699 aa23.19■■□□□ 1.3
LDLRAD2-201ENST00000344642 PCGF6Q9BYE7 350 aa23.14■■□□□ 1.3
LDLRAD2-201ENST00000344642 MYO15BQ96JP2 1530 aa22.42■■□□□ 1.18
LDLRAD2-201ENST00000344642 CHIC1Q5VXU3 224 aa22.38■■□□□ 1.17
LDLRAD2-201ENST00000344642 DCAF8L2P0C7V8 631 aa22.35■■□□□ 1.17
LDLRAD2-201ENST00000344642 PELP1Q8IZL8 1130 aaKnown RBP22.31■■□□□ 1.16
LDLRAD2-201ENST00000344642 LOC105371045A0A1W2PR82 267 aa22.28■■□□□ 1.16
LDLRAD2-201ENST00000344642 EHMT2Q96KQ7 1210 aa22.17■■□□□ 1.14
LDLRAD2-201ENST00000344642 SCAF1Q9H7N4 1312 aaKnown RBP22.17■■□□□ 1.14
LDLRAD2-201ENST00000344642 TRIM26Q12899 539 aaPredicted RBP21.93■■□□□ 1.1
LDLRAD2-201ENST00000344642 SLC24A1O60721 1099 aa21.75■■□□□ 1.07
LDLRAD2-201ENST00000344642 CCDC180Q9P1Z9 1646 aa21.72■■□□□ 1.07
LDLRAD2-201ENST00000344642 FAM9AQ8IZU1 332 aaPredicted RBP21.71■■□□□ 1.07
LDLRAD2-201ENST00000344642 ZEB1P37275 1124 aaPredicted RBP21.63■■□□□ 1.05
LDLRAD2-201ENST00000344642 NEUROD1Q13562 356 aa21.6■■□□□ 1.05
LDLRAD2-201ENST00000344642 DCAF1Q9Y4B6 1507 aa21.59■■□□□ 1.05
LDLRAD2-201ENST00000344642 GTF3C3Q9Y5Q9 886 aa21.58■■□□□ 1.05
LDLRAD2-201ENST00000344642 ABCC9O60706 1549 aa21.54■■□□□ 1.04
LDLRAD2-201ENST00000344642 ACIN1Q9UKV3 1341 aaKnown RBP21.5■■□□□ 1.03
LDLRAD2-201ENST00000344642 TTBK1Q5TCY1 1321 aaPredicted RBP21.43■■□□□ 1.02
LDLRAD2-201ENST00000344642 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.42■■□□□ 1.02
LDLRAD2-201ENST00000344642 YTHDC1Q96MU7 727 aaKnown RBP21.42■■□□□ 1.02
LDLRAD2-201ENST00000344642 CCER1Q8TC90 406 aaPredicted RBP21.35■■□□□ 1.01
LDLRAD2-201ENST00000344642 MYT1Q01538 1121 aa21.34■■□□□ 1.01
LDLRAD2-201ENST00000344642 CENPBP07199 599 aaPredicted RBP21.33■■□□□ 1
LDLRAD2-201ENST00000344642 DIEXFQ68CQ4 756 aaKnown RBP21.24■□□□□ 0.99
LDLRAD2-201ENST00000344642 TRIM41Q8WV44 630 aa21.22■□□□□ 0.99
LDLRAD2-201ENST00000344642 ZCCHC6Q5VYS8 1495 aaKnown RBP21.11■□□□□ 0.97
LDLRAD2-201ENST00000344642 MIER1Q8N108 512 aa20.71■□□□□ 0.91
LDLRAD2-201ENST00000344642 ZNF316A6NFI3 1004 aaPredicted RBP20.65■□□□□ 0.9
LDLRAD2-201ENST00000344642 PABPN1Q86U42 306 aaKnown RBP eCLIP20.59■□□□□ 0.89
LDLRAD2-201ENST00000344642 SCRIBQ14160 1630 aa20.57■□□□□ 0.88
LDLRAD2-201ENST00000344642 PLPPR3Q6T4P5 718 aa20.54■□□□□ 0.88
LDLRAD2-201ENST00000344642 HNRNPUL2Q1KMD3 747 aaKnown RBP20.53■□□□□ 0.88
LDLRAD2-201ENST00000344642 NACADO15069 1562 aa20.53■□□□□ 0.88
LDLRAD2-201ENST00000344642 RB1CC1Q8TDY2 1594 aa20.52■□□□□ 0.88
LDLRAD2-201ENST00000344642 BCL11AQ9H165 835 aa20.46■□□□□ 0.87
LDLRAD2-201ENST00000344642 BCANQ96GW7 911 aa20.44■□□□□ 0.86
LDLRAD2-201ENST00000344642 RANGAP1P46060 587 aaPredicted RBP20.35■□□□□ 0.85
LDLRAD2-201ENST00000344642 AEBP2Q6ZN18 517 aaPredicted RBP20.33■□□□□ 0.85
LDLRAD2-201ENST00000344642 SUPT16HQ9Y5B9 1047 aaKnown RBP20.32■□□□□ 0.84
LDLRAD2-201ENST00000344642 UBTFP17480 764 aaKnown RBP20.31■□□□□ 0.84
LDLRAD2-201ENST00000344642 ANP32EQ9BTT0 268 aa20.3■□□□□ 0.84
LDLRAD2-201ENST00000344642 CSRNP3Q8WYN3 585 aa20.28■□□□□ 0.84
LDLRAD2-201ENST00000344642 RSF1Q96T23 1441 aaPredicted RBP20.28■□□□□ 0.84
LDLRAD2-201ENST00000344642 TSHZ2Q9NRE2 1034 aa20.24■□□□□ 0.83
LDLRAD2-201ENST00000344642 RTN4Q9NQC3 1192 aaKnown RBP20.16■□□□□ 0.82
LDLRAD2-201ENST00000344642 ITGAEP38570 1179 aa20.03■□□□□ 0.8
LDLRAD2-201ENST00000344642 KCNH8Q96L42 1107 aa20.02■□□□□ 0.79
LDLRAD2-201ENST00000344642 FKBP8Q14318 412 aa20.01■□□□□ 0.79
LDLRAD2-201ENST00000344642 CEP162Q5TB80 1403 aa19.99■□□□□ 0.79
LDLRAD2-201ENST00000344642 APLP2Q06481 763 aa19.98■□□□□ 0.79
LDLRAD2-201ENST00000344642 CECR2Q9BXF3 1484 aa19.86■□□□□ 0.77
LDLRAD2-201ENST00000344642 ERICH6Q7L0X2 663 aa19.85■□□□□ 0.77
LDLRAD2-201ENST00000344642 NEFLP07196 543 aa19.83■□□□□ 0.77
LDLRAD2-201ENST00000344642 RBM19Q9Y4C8 960 aaKnown RBP19.82■□□□□ 0.76
LDLRAD2-201ENST00000344642 TRIM52Q96A61 297 aa19.8■□□□□ 0.76
LDLRAD2-201ENST00000344642 SOGA1O94964 1423 aa19.79■□□□□ 0.76
LDLRAD2-201ENST00000344642 CLSPNQ9HAW4 1339 aa19.75■□□□□ 0.75
LDLRAD2-201ENST00000344642 CCDC88BA6NC98 1476 aa19.75■□□□□ 0.75
LDLRAD2-201ENST00000344642 ABCC8Q09428 1581 aa19.74■□□□□ 0.75
LDLRAD2-201ENST00000344642 HIRIP3Q9BW71 556 aaPredicted RBP19.73■□□□□ 0.75
LDLRAD2-201ENST00000344642 PRKCSHP14314 528 aaPredicted RBP19.73■□□□□ 0.75
LDLRAD2-201ENST00000344642 IRX6P78412 446 aaPredicted RBP19.72■□□□□ 0.75
LDLRAD2-201ENST00000344642 DDX10Q13206 875 aaKnown RBP19.71■□□□□ 0.75
LDLRAD2-201ENST00000344642 WRNQ14191 1432 aaPredicted RBP eCLIP19.69■□□□□ 0.74
LDLRAD2-201ENST00000344642 RUSC2Q8N2Y8 1516 aa19.66■□□□□ 0.74
LDLRAD2-201ENST00000344642 TNIKQ9UKE5 1360 aa19.65■□□□□ 0.74
LDLRAD2-201ENST00000344642 MROH2BQ7Z745 1585 aa19.65■□□□□ 0.74
LDLRAD2-201ENST00000344642 UNC13AQ9UPW8 1703 aa19.62■□□□□ 0.73
LDLRAD2-201ENST00000344642 MSH5O43196 834 aa19.6■□□□□ 0.73
LDLRAD2-201ENST00000344642 BICRAQ9NZM4 1560 aa19.6■□□□□ 0.73
LDLRAD2-201ENST00000344642 BAZ1AQ9NRL2 1556 aaPredicted RBP19.59■□□□□ 0.73
LDLRAD2-201ENST00000344642 WIZO95785 1651 aa19.58■□□□□ 0.72
LDLRAD2-201ENST00000344642 NBR1Q14596 966 aa19.52■□□□□ 0.71
LDLRAD2-201ENST00000344642 CLIP1P30622 1438 aa19.48■□□□□ 0.71
LDLRAD2-201ENST00000344642 DHX57Q6P158 1386 aaKnown RBP19.47■□□□□ 0.71
LDLRAD2-201ENST00000344642 CDK11AQ9UQ88 783 aaPredicted RBP19.44■□□□□ 0.7
LDLRAD2-201ENST00000344642 DEKP35659 375 aaKnown RBP19.41■□□□□ 0.7
LDLRAD2-201ENST00000344642 GOLGA3Q08378 1498 aa19.41■□□□□ 0.7
LDLRAD2-201ENST00000344642 SMARCA4P51532 1647 aa19.4■□□□□ 0.7
LDLRAD2-201ENST00000344642 KANK4Q5T7N3 995 aaPredicted RBP19.39■□□□□ 0.7
LDLRAD2-201ENST00000344642 KCNA4P22459 653 aa19.39■□□□□ 0.69
LDLRAD2-201ENST00000344642 SIN3AQ96ST3 1273 aa19.39■□□□□ 0.69
LDLRAD2-201ENST00000344642 BAZ1BQ9UIG0 1483 aaKnown RBP19.36■□□□□ 0.69
LDLRAD2-201ENST00000344642 ANP32CO43423 234 aa19.36■□□□□ 0.69
LDLRAD2-201ENST00000344642 ANO8Q9HCE9 1232 aaPredicted RBP19.35■□□□□ 0.69
LDLRAD2-201ENST00000344642 HNRNPUQ00839 825 aaKnown RBP eCLIP19.35■□□□□ 0.69
LDLRAD2-201ENST00000344642 CNGB1Q14028 1251 aaPredicted RBP19.34■□□□□ 0.69
LDLRAD2-201ENST00000344642 CCDC136Q96JN2 1154 aa19.29■□□□□ 0.68
LDLRAD2-201ENST00000344642 ATP1B4Q9UN42 357 aaPredicted RBP19.29■□□□□ 0.68
LDLRAD2-201ENST00000344642 EIF4G1Q04637 1599 aaKnown RBP19.28■□□□□ 0.68
LDLRAD2-201ENST00000344642 VPS8Q8N3P4 1428 aa19.28■□□□□ 0.68
LDLRAD2-201ENST00000344642 ATAD2BQ9ULI0 1458 aa19.27■□□□□ 0.68
LDLRAD2-201ENST00000344642 PHF23Q9BUL5 403 aaPredicted RBP19.26■□□□□ 0.67
LDLRAD2-201ENST00000344642 SENP3-EIF4A1A0A087X0R7 540 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms