Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 AC067863.1-201ENST00000494933 530 ntBASIC13.2□□□□□ -0.3
ODF4Q2M2E3 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 DUX4L27-201ENST00000554796 1261 ntBASIC13.2□□□□□ -0.3
ODF4Q2M2E3 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
ODF4Q2M2E3 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 AL138799.1-201ENST00000448213 1675 ntBASIC13.19□□□□□ -0.3
ODF4Q2M2E3 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.19□□□□□ -0.3
ODF4Q2M2E3 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 TPT1P11-201ENST00000458482 498 ntBASIC13.19□□□□□ -0.3
ODF4Q2M2E3 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 FAM86LP-201ENST00000478302 853 ntBASIC13.19□□□□□ -0.3
ODF4Q2M2E3 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 AC009407.1-201ENST00000568958 598 ntBASIC13.19□□□□□ -0.3
ODF4Q2M2E3 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 AL049840.4-201ENST00000602422 811 ntBASIC13.19□□□□□ -0.3
ODF4Q2M2E3 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 DRD5P1-201ENST00000456605 1438 ntBASIC13.19□□□□□ -0.3
ODF4Q2M2E3 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 MST1P2-201ENST00000457982 2291 ntBASIC13.19□□□□□ -0.3
ODF4Q2M2E3 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.19□□□□□ -0.3
ODF4Q2M2E3 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 AL122018.1-201ENST00000446607 2310 ntBASIC13.18□□□□□ -0.3
ODF4Q2M2E3 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 AC093525.8-201ENST00000624099 1342 ntBASIC13.18□□□□□ -0.3
ODF4Q2M2E3 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 AL137784.3-201ENST00000623858 2288 ntBASIC13.18□□□□□ -0.3
ODF4Q2M2E3 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ODF4Q2M2E3 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms