RNA–Protein interactions for RNA: ENST00000317368.11

AP1B1-201, Transcript of adaptor related protein complex 1 subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene AP1B1, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1B1-201ENST00000317368 NISCHQ9Y2I1 1504 aa24.99■■□□□ 1.59
AP1B1-201ENST00000317368 DCAF8L2P0C7V8 631 aa24■■□□□ 1.43
AP1B1-201ENST00000317368 SUPT5HO00267 1087 aaKnown RBP23.86■■□□□ 1.41
AP1B1-201ENST00000317368 SHROOM4Q9ULL8 1493 aa23.81■■□□□ 1.4
AP1B1-201ENST00000317368 EHMT2Q96KQ7 1210 aa22.89■■□□□ 1.25
AP1B1-201ENST00000317368 PCGF6Q9BYE7 350 aa22.78■■□□□ 1.24
AP1B1-201ENST00000317368 FAM9AQ8IZU1 332 aaPredicted RBP22.39■■□□□ 1.18
AP1B1-201ENST00000317368 PPARGC1BQ86YN6 1023 aaKnown RBP22.19■■□□□ 1.14
AP1B1-201ENST00000317368 LOC105371045A0A1W2PR82 267 aa22.13■■□□□ 1.13
AP1B1-201ENST00000317368 TTBK1Q5TCY1 1321 aaPredicted RBP22.11■■□□□ 1.13
AP1B1-201ENST00000317368 CHIC1Q5VXU3 224 aa22.09■■□□□ 1.13
AP1B1-201ENST00000317368 HRCP23327 699 aa22.07■■□□□ 1.12
AP1B1-201ENST00000317368 TRIM41Q8WV44 630 aa21.79■■□□□ 1.08
AP1B1-201ENST00000317368 TRIM26Q12899 539 aaPredicted RBP21.57■■□□□ 1.04
AP1B1-201ENST00000317368 CCER1Q8TC90 406 aaPredicted RBP21.51■■□□□ 1.03
AP1B1-201ENST00000317368 RANGAP1P46060 587 aaPredicted RBP21.48■■□□□ 1.03
AP1B1-201ENST00000317368 ZEB1P37275 1124 aaPredicted RBP21.34■■□□□ 1.01
AP1B1-201ENST00000317368 MYO15BQ96JP2 1530 aa21.31■■□□□ 1
AP1B1-201ENST00000317368 YTHDC1Q96MU7 727 aaKnown RBP21.29■■□□□ 1
AP1B1-201ENST00000317368 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.24■□□□□ 0.99
AP1B1-201ENST00000317368 UBTFP17480 764 aaKnown RBP21.17■□□□□ 0.98
AP1B1-201ENST00000317368 APLP2Q06481 763 aa21.08■□□□□ 0.97
AP1B1-201ENST00000317368 CENPBP07199 599 aaPredicted RBP21.05■□□□□ 0.96
AP1B1-201ENST00000317368 HNRNPUL2Q1KMD3 747 aaKnown RBP20.91■□□□□ 0.94
AP1B1-201ENST00000317368 ZCCHC6Q5VYS8 1495 aaKnown RBP20.9■□□□□ 0.94
AP1B1-201ENST00000317368 PELP1Q8IZL8 1130 aaKnown RBP20.85■□□□□ 0.93
AP1B1-201ENST00000317368 DIEXFQ68CQ4 756 aaKnown RBP20.81■□□□□ 0.92
AP1B1-201ENST00000317368 GTF3C3Q9Y5Q9 886 aa20.71■□□□□ 0.91
AP1B1-201ENST00000317368 ITGAEP38570 1179 aa20.68■□□□□ 0.9
AP1B1-201ENST00000317368 ATP1B4Q9UN42 357 aaPredicted RBP20.67■□□□□ 0.9
AP1B1-201ENST00000317368 DCAF1Q9Y4B6 1507 aa20.65■□□□□ 0.9
AP1B1-201ENST00000317368 SCAF1Q9H7N4 1312 aaKnown RBP20.63■□□□□ 0.89
AP1B1-201ENST00000317368 ABCC9O60706 1549 aa20.6■□□□□ 0.89
AP1B1-201ENST00000317368 NEUROD1Q13562 356 aa20.51■□□□□ 0.87
AP1B1-201ENST00000317368 PABPN1Q86U42 306 aaKnown RBP eCLIP20.49■□□□□ 0.87
AP1B1-201ENST00000317368 ACIN1Q9UKV3 1341 aaKnown RBP20.49■□□□□ 0.87
AP1B1-201ENST00000317368 SCRIBQ14160 1630 aa20.41■□□□□ 0.86
AP1B1-201ENST00000317368 ZNF316A6NFI3 1004 aaPredicted RBP20.29■□□□□ 0.84
AP1B1-201ENST00000317368 RSF1Q96T23 1441 aaPredicted RBP20.27■□□□□ 0.83
AP1B1-201ENST00000317368 CSRNP3Q8WYN3 585 aa20.22■□□□□ 0.83
AP1B1-201ENST00000317368 BCANQ96GW7 911 aa20.22■□□□□ 0.83
AP1B1-201ENST00000317368 CNGB1Q14028 1251 aaPredicted RBP20.17■□□□□ 0.82
AP1B1-201ENST00000317368 CCDC180Q9P1Z9 1646 aa20.13■□□□□ 0.81
AP1B1-201ENST00000317368 MIER1Q8N108 512 aa20.1■□□□□ 0.81
AP1B1-201ENST00000317368 NEFLP07196 543 aa20.08■□□□□ 0.81
AP1B1-201ENST00000317368 FAM50AQ14320 339 aaKnown RBP20■□□□□ 0.79
AP1B1-201ENST00000317368 CECR2Q9BXF3 1484 aa19.98■□□□□ 0.79
AP1B1-201ENST00000317368 ERICH6Q7L0X2 663 aa19.97■□□□□ 0.79
AP1B1-201ENST00000317368 P3H3Q8IVL6 736 aa19.92■□□□□ 0.78
AP1B1-201ENST00000317368 MYT1Q01538 1121 aa19.92■□□□□ 0.78
AP1B1-201ENST00000317368 RB1CC1Q8TDY2 1594 aa19.91■□□□□ 0.78
AP1B1-201ENST00000317368 POLR3GLQ9BT43 218 aa19.9■□□□□ 0.78
AP1B1-201ENST00000317368 CEP162Q5TB80 1403 aa19.85■□□□□ 0.77
AP1B1-201ENST00000317368 HIRIP3Q9BW71 556 aaPredicted RBP19.83■□□□□ 0.77
AP1B1-201ENST00000317368 SOGA1O94964 1423 aa19.75■□□□□ 0.75
AP1B1-201ENST00000317368 DDX10Q13206 875 aaKnown RBP19.74■□□□□ 0.75
AP1B1-201ENST00000317368 ARID3CA6NKF2 412 aa19.68■□□□□ 0.74
AP1B1-201ENST00000317368 MROH2BQ7Z745 1585 aa19.67■□□□□ 0.74
AP1B1-201ENST00000317368 TRIM52Q96A61 297 aa19.67■□□□□ 0.74
AP1B1-201ENST00000317368 FKBP8Q14318 412 aa19.67■□□□□ 0.74
AP1B1-201ENST00000317368 CLIP1P30622 1438 aa19.64■□□□□ 0.73
AP1B1-201ENST00000317368 ABCC8Q09428 1581 aa19.63■□□□□ 0.73
AP1B1-201ENST00000317368 CCDC88BA6NC98 1476 aa19.62■□□□□ 0.73
AP1B1-201ENST00000317368 ANP32CO43423 234 aa19.57■□□□□ 0.72
AP1B1-201ENST00000317368 TNIKQ9UKE5 1360 aa19.55■□□□□ 0.72
AP1B1-201ENST00000317368 IRX6P78412 446 aaPredicted RBP19.52■□□□□ 0.72
AP1B1-201ENST00000317368 ZNF326Q5BKZ1 582 aaKnown RBP19.49■□□□□ 0.71
AP1B1-201ENST00000317368 WRNQ14191 1432 aaPredicted RBP eCLIP19.46■□□□□ 0.71
AP1B1-201ENST00000317368 GOLGA3Q08378 1498 aa19.46■□□□□ 0.71
AP1B1-201ENST00000317368 SENP3-EIF4A1A0A087X0R7 540 aa19.45■□□□□ 0.7
AP1B1-201ENST00000317368 RUSC2Q8N2Y8 1516 aa19.45■□□□□ 0.7
AP1B1-201ENST00000317368 WIZO95785 1651 aa19.45■□□□□ 0.7
AP1B1-201ENST00000317368 SIN3AQ96ST3 1273 aa19.44■□□□□ 0.7
AP1B1-201ENST00000317368 KANK4Q5T7N3 995 aaPredicted RBP19.42■□□□□ 0.7
AP1B1-201ENST00000317368 SUPT16HQ9Y5B9 1047 aaKnown RBP19.4■□□□□ 0.7
AP1B1-201ENST00000317368 HNRNPUQ00839 825 aaKnown RBP eCLIP19.4■□□□□ 0.7
AP1B1-201ENST00000317368 CHIC2Q9UKJ5 165 aa19.38■□□□□ 0.69
AP1B1-201ENST00000317368 KCNH8Q96L42 1107 aa19.36■□□□□ 0.69
AP1B1-201ENST00000317368 FAM9BQ8IZU0 186 aa19.32■□□□□ 0.68
AP1B1-201ENST00000317368 CDK11AQ9UQ88 783 aaPredicted RBP19.3■□□□□ 0.68
AP1B1-201ENST00000317368 EEA1Q15075 1411 aa19.27■□□□□ 0.68
AP1B1-201ENST00000317368 TONSLQ96HA7 1378 aa19.27■□□□□ 0.67
AP1B1-201ENST00000317368 BAZ1AQ9NRL2 1556 aaPredicted RBP19.26■□□□□ 0.67
AP1B1-201ENST00000317368 CEP164Q9UPV0 1460 aa19.24■□□□□ 0.67
AP1B1-201ENST00000317368 NACADO15069 1562 aa19.24■□□□□ 0.67
AP1B1-201ENST00000317368 SALL2Q9Y467 1007 aaPredicted RBP19.2■□□□□ 0.66
AP1B1-201ENST00000317368 RRP7BPQ9NSQ0 103 aa19.18■□□□□ 0.66
AP1B1-201ENST00000317368 VPS8Q8N3P4 1428 aa19.15■□□□□ 0.66
AP1B1-201ENST00000317368 ZNF777Q9ULD5 760 aaPredicted RBP19.14■□□□□ 0.66
AP1B1-201ENST00000317368 FBLN2P98095 1184 aa19.12■□□□□ 0.65
AP1B1-201ENST00000317368 NPM2Q86SE8 214 aaKnown RBP19.1■□□□□ 0.65
AP1B1-201ENST00000317368 RAPGEF2Q9Y4G8 1499 aa19.1■□□□□ 0.65
AP1B1-201ENST00000317368 CLSPNQ9HAW4 1339 aa19.09■□□□□ 0.65
AP1B1-201ENST00000317368 TSHZ2Q9NRE2 1034 aa19.09■□□□□ 0.65
AP1B1-201ENST00000317368 CCNB3Q8WWL7 1395 aa19.08■□□□□ 0.65
AP1B1-201ENST00000317368 NBR1Q14596 966 aa19.07■□□□□ 0.64
AP1B1-201ENST00000317368 ANP32EQ9BTT0 268 aa19.07■□□□□ 0.64
AP1B1-201ENST00000317368 BAZ1BQ9UIG0 1483 aaKnown RBP19.07■□□□□ 0.64
AP1B1-201ENST00000317368 MRS2Q9HD23 443 aa19.06■□□□□ 0.64
AP1B1-201ENST00000317368 RTL5Q5HYW3 569 aaPredicted RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms