Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 ALG1L8P-201ENST00000533887 760 ntBASIC11.18□□□□□ -0.62
SNAI2O43623 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC11.18□□□□□ -0.62
SNAI2O43623 TSFM-210ENST00000550559 897 ntTSL 5 BASIC11.18□□□□□ -0.62
SNAI2O43623 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
SNAI2O43623 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
SNAI2O43623 CAND2-206ENST00000626378 333 ntTSL 5 BASIC11.18□□□□□ -0.62
SNAI2O43623 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
SNAI2O43623 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
SNAI2O43623 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SNAI2O43623 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC11.18□□□□□ -0.62
SNAI2O43623 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC11.18□□□□□ -0.62
SNAI2O43623 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SNAI2O43623 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
SNAI2O43623 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SNAI2O43623 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
SNAI2O43623 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
SNAI2O43623 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
SNAI2O43623 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
SNAI2O43623 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
SNAI2O43623 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC11.18□□□□□ -0.62
SNAI2O43623 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
SNAI2O43623 CYP2AB1P-202ENST00000454440 1456 ntBASIC11.18□□□□□ -0.62
SNAI2O43623 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC11.18□□□□□ -0.62
SNAI2O43623 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC11.18□□□□□ -0.62
SNAI2O43623 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
SNAI2O43623 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
SNAI2O43623 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SNAI2O43623 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SNAI2O43623 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SNAI2O43623 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SNAI2O43623 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
SNAI2O43623 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SNAI2O43623 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SNAI2O43623 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC11.17□□□□□ -0.62
SNAI2O43623 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SNAI2O43623 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
SNAI2O43623 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SNAI2O43623 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SNAI2O43623 IL9RP2-201ENST00000423948 1312 ntBASIC11.17□□□□□ -0.62
SNAI2O43623 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SNAI2O43623 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
SNAI2O43623 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SNAI2O43623 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC11.17□□□□□ -0.62
SNAI2O43623 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC11.17□□□□□ -0.62
SNAI2O43623 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
SNAI2O43623 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SNAI2O43623 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC11.17□□□□□ -0.62
SNAI2O43623 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SNAI2O43623 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
SNAI2O43623 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
SNAI2O43623 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SNAI2O43623 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
SNAI2O43623 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
SNAI2O43623 CD81-202ENST00000381036 880 ntTSL 3 BASIC11.17□□□□□ -0.62
SNAI2O43623 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC11.17□□□□□ -0.62
SNAI2O43623 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SNAI2O43623 AC015922.1-201ENST00000421102 1152 ntBASIC11.17□□□□□ -0.62
SNAI2O43623 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC11.17□□□□□ -0.62
SNAI2O43623 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC11.17□□□□□ -0.62
SNAI2O43623 KRT18P43-201ENST00000469825 1281 ntBASIC11.17□□□□□ -0.62
SNAI2O43623 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC11.17□□□□□ -0.62
SNAI2O43623 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC11.17□□□□□ -0.62
SNAI2O43623 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SNAI2O43623 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC11.17□□□□□ -0.62
SNAI2O43623 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC11.17□□□□□ -0.62
SNAI2O43623 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC11.17□□□□□ -0.62
SNAI2O43623 PRR29-209ENST00000582540 967 ntTSL 2 BASIC11.17□□□□□ -0.62
SNAI2O43623 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC11.17□□□□□ -0.62
SNAI2O43623 RN7SL828P-201ENST00000607615 303 ntBASIC11.17□□□□□ -0.62
SNAI2O43623 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC11.17□□□□□ -0.62
SNAI2O43623 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC11.17□□□□□ -0.62
SNAI2O43623 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC11.17□□□□□ -0.62
SNAI2O43623 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
SNAI2O43623 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC11.17□□□□□ -0.62
SNAI2O43623 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SNAI2O43623 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC11.17□□□□□ -0.62
SNAI2O43623 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SNAI2O43623 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC11.17□□□□□ -0.62
SNAI2O43623 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SNAI2O43623 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
SNAI2O43623 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SNAI2O43623 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SNAI2O43623 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SNAI2O43623 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC11.17□□□□□ -0.62
SNAI2O43623 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SNAI2O43623 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SNAI2O43623 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
SNAI2O43623 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SNAI2O43623 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SNAI2O43623 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SNAI2O43623 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SNAI2O43623 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SNAI2O43623 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
SNAI2O43623 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC11.16□□□□□ -0.62
SNAI2O43623 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
SNAI2O43623 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
SNAI2O43623 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SNAI2O43623 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
SNAI2O43623 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC11.16□□□□□ -0.62
SNAI2O43623 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC11.16□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms