Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 AC015909.3-201ENST00000572855 1794 ntBASIC12.88□□□□□ -0.35
MBD3L3A6NE82 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 AC018529.2-202ENST00000611482 3087 ntBASIC12.87□□□□□ -0.35
MBD3L3A6NE82 MBP-202ENST00000355994 2772 ntTSL 5 BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 OR2K2-202ENST00000374428 1038 ntBASIC12.87□□□□□ -0.35
MBD3L3A6NE82 MIR33B-201ENST00000385104 96 ntBASIC12.87□□□□□ -0.35
MBD3L3A6NE82 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 MIR3677-201ENST00000578964 60 ntBASIC12.87□□□□□ -0.35
MBD3L3A6NE82 MIR4706-201ENST00000582134 82 ntBASIC12.87□□□□□ -0.35
MBD3L3A6NE82 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 AL591471.1-201ENST00000621855 229 ntBASIC12.87□□□□□ -0.35
MBD3L3A6NE82 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 AC067930.6-201ENST00000623257 4947 ntBASIC12.87□□□□□ -0.35
MBD3L3A6NE82 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 KRT18P9-201ENST00000604826 1300 ntBASIC12.87□□□□□ -0.35
MBD3L3A6NE82 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
MBD3L3A6NE82 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
MBD3L3A6NE82 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
MBD3L3A6NE82 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
MBD3L3A6NE82 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
MBD3L3A6NE82 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
MBD3L3A6NE82 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
MBD3L3A6NE82 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC12.86□□□□□ -0.35
MBD3L3A6NE82 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
MBD3L3A6NE82 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
MBD3L3A6NE82 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
MBD3L3A6NE82 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
MBD3L3A6NE82 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
MBD3L3A6NE82 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.86□□□□□ -0.35
MBD3L3A6NE82 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
MBD3L3A6NE82 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
MBD3L3A6NE82 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms