Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 AC004835.2-201ENST00000603762 682 ntBASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 AP001059.3-201ENST00000619053 235 ntBASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 AC027612.1-201ENST00000445234 2395 ntBASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 AC073548.1-201ENST00000624088 1882 ntBASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NSMCE2Q96MF7 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 AL353779.1-201ENST00000434793 351 ntBASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 HLA-V-204ENST00000476601 1289 ntBASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 AP000344.2-201ENST00000512987 629 ntBASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 PGAM5P1-201ENST00000518923 814 ntBASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 AC092364.2-202ENST00000597012 1073 ntBASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 TUBB3P1-201ENST00000405796 1332 ntBASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 PCDHA5-203ENST00000614258 4248 ntBASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 AC215219.1-201ENST00000400706 1817 ntBASIC14.04□□□□□ -0.16
NSMCE2Q96MF7 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NSMCE2Q96MF7 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms