Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA3P32297 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA3P32297 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA3P32297 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA3P32297 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA3P32297 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.69■□□□□ 0.1
CHRNA3P32297 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA3P32297 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA3P32297 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CHRNA3P32297 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA3P32297 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CHRNA3P32297 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.69■□□□□ 0.1
CHRNA3P32297 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.69■□□□□ 0.1
CHRNA3P32297 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.69■□□□□ 0.1
CHRNA3P32297 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA3P32297 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA3P32297 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CHRNA3P32297 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHRNA3P32297 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.68■□□□□ 0.1
CHRNA3P32297 AC093525.8-201ENST00000624099 1342 ntBASIC15.68■□□□□ 0.1
CHRNA3P32297 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA3P32297 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CHRNA3P32297 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA3P32297 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA3P32297 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA3P32297 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA3P32297 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CHRNA3P32297 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.68■□□□□ 0.1
CHRNA3P32297 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.68■□□□□ 0.1
CHRNA3P32297 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA3P32297 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CHRNA3P32297 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA3P32297 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA3P32297 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA3P32297 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CHRNA3P32297 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA3P32297 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.68■□□□□ 0.1
CHRNA3P32297 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.68■□□□□ 0.1
CHRNA3P32297 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CHRNA3P32297 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.68■□□□□ 0.1
CHRNA3P32297 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CHRNA3P32297 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA3P32297 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA3P32297 USP32P1-208ENST00000506594 1164 ntBASIC15.68■□□□□ 0.1
CHRNA3P32297 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA3P32297 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.68■□□□□ 0.1
CHRNA3P32297 PTP4A1P2-201ENST00000546033 454 ntBASIC15.68■□□□□ 0.1
CHRNA3P32297 AC009486.1-201ENST00000569860 813 ntBASIC15.68■□□□□ 0.1
CHRNA3P32297 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.68■□□□□ 0.1
CHRNA3P32297 AL008721.1-201ENST00000609964 604 ntBASIC15.68■□□□□ 0.1
CHRNA3P32297 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA3P32297 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CHRNA3P32297 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA3P32297 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CHRNA3P32297 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA3P32297 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA3P32297 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CHRNA3P32297 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA3P32297 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA3P32297 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHRNA3P32297 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA3P32297 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA3P32297 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA3P32297 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA3P32297 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA3P32297 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA3P32297 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA3P32297 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA3P32297 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA3P32297 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA3P32297 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA3P32297 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA3P32297 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CHRNA3P32297 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA3P32297 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.67■□□□□ 0.1
CHRNA3P32297 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.67■□□□□ 0.1
CHRNA3P32297 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.67■□□□□ 0.1
CHRNA3P32297 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA3P32297 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.67■□□□□ 0.1
CHRNA3P32297 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CHRNA3P32297 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.67■□□□□ 0.1
CHRNA3P32297 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.67■□□□□ 0.1
CHRNA3P32297 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA3P32297 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CHRNA3P32297 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.67■□□□□ 0.1
CHRNA3P32297 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.67■□□□□ 0.1
CHRNA3P32297 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.67■□□□□ 0.1
CHRNA3P32297 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.67■□□□□ 0.1
CHRNA3P32297 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.67■□□□□ 0.1
CHRNA3P32297 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CHRNA3P32297 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.67■□□□□ 0.1
CHRNA3P32297 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.67■□□□□ 0.1
CHRNA3P32297 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHRNA3P32297 AP001063.1-201ENST00000568332 529 ntBASIC15.67■□□□□ 0.1
CHRNA3P32297 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.67■□□□□ 0.1
CHRNA3P32297 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.67■□□□□ 0.1
CHRNA3P32297 AC233724.13-201ENST00000598383 410 ntBASIC15.67■□□□□ 0.1
CHRNA3P32297 AL359881.2-201ENST00000602973 570 ntBASIC15.67■□□□□ 0.1
CHRNA3P32297 AC017083.2-201ENST00000608069 979 ntBASIC15.67■□□□□ 0.1
CHRNA3P32297 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms