Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SRFBP1Q8NEF9 AC092135.3-201ENST00000624151 1846 ntBASIC14.22□□□□□ -0.13
SRFBP1Q8NEF9 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SRFBP1Q8NEF9 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SRFBP1Q8NEF9 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SRFBP1Q8NEF9 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SRFBP1Q8NEF9 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SRFBP1Q8NEF9 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SRFBP1Q8NEF9 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.22□□□□□ -0.13
SRFBP1Q8NEF9 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SRFBP1Q8NEF9 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 AC106881.1-201ENST00000605849 3329 ntBASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 AC139749.1-202ENST00000617529 3139 ntBASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 MRPL37P1-201ENST00000592451 1337 ntBASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SRFBP1Q8NEF9 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.14
SRFBP1Q8NEF9 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.21□□□□□ -0.14
SRFBP1Q8NEF9 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SRFBP1Q8NEF9 AC113367.3-201ENST00000508316 1912 ntBASIC14.21□□□□□ -0.14
SRFBP1Q8NEF9 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
SRFBP1Q8NEF9 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SRFBP1Q8NEF9 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SRFBP1Q8NEF9 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SRFBP1Q8NEF9 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SRFBP1Q8NEF9 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
SRFBP1Q8NEF9 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SRFBP1Q8NEF9 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 AC234783.1-201ENST00000441761 496 ntBASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 TPT1P11-201ENST00000458482 498 ntBASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SRFBP1Q8NEF9 GCOM2-201ENST00000509133 1104 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms