RNA–Protein interactions for RNA: ENST00000377595.7

UCHL3-201, Transcript of ubiquitin C-terminal hydrolase L3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UCHL3, Length 844 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL3-201ENST00000377595 NISCHQ9Y2I1 1504 aa37.83■■■■□ 3.65
UCHL3-201ENST00000377595 ABCC9O60706 1549 aa33.91■■■■□ 3.02
UCHL3-201ENST00000377595 CCDC180Q9P1Z9 1646 aa33.73■■■□□ 2.99
UCHL3-201ENST00000377595 DCAF8L2P0C7V8 631 aa32.25■■■□□ 2.75
UCHL3-201ENST00000377595 RB1CC1Q8TDY2 1594 aa32.2■■■□□ 2.75
UCHL3-201ENST00000377595 NACADO15069 1562 aa32.01■■■□□ 2.71
UCHL3-201ENST00000377595 DNAJC5BQ9UF47 199 aa31.86■■■□□ 2.69
UCHL3-201ENST00000377595 PABPN1Q86U42 306 aaKnown RBP eCLIP31.74■■■□□ 2.67
UCHL3-201ENST00000377595 MYO15BQ96JP2 1530 aa31.55■■■□□ 2.64
UCHL3-201ENST00000377595 ZCCHC6Q5VYS8 1495 aaKnown RBP31.31■■■□□ 2.6
UCHL3-201ENST00000377595 UNC13AQ9UPW8 1703 aa31.29■■■□□ 2.6
UCHL3-201ENST00000377595 BICRAQ9NZM4 1560 aa31.23■■■□□ 2.59
UCHL3-201ENST00000377595 DCAF1Q9Y4B6 1507 aa31.19■■■□□ 2.58
UCHL3-201ENST00000377595 SCRIBQ14160 1630 aa30.87■■■□□ 2.53
UCHL3-201ENST00000377595 SHROOM4Q9ULL8 1493 aa30.78■■■□□ 2.52
UCHL3-201ENST00000377595 CC2D2AQ9P2K1 1620 aa30.53■■■□□ 2.48
UCHL3-201ENST00000377595 CECR2Q9BXF3 1484 aa30.52■■■□□ 2.48
UCHL3-201ENST00000377595 EIF4G1Q04637 1599 aaKnown RBP30.48■■■□□ 2.47
UCHL3-201ENST00000377595 NCAPD3P42695 1498 aa29.61■■■□□ 2.33
UCHL3-201ENST00000377595 ATAD2BQ9ULI0 1458 aa29.54■■■□□ 2.32
UCHL3-201ENST00000377595 SMARCA4P51532 1647 aa29.42■■■□□ 2.3
UCHL3-201ENST00000377595 SMARCA2P51531 1590 aa29.4■■■□□ 2.3
UCHL3-201ENST00000377595 BAZ1AQ9NRL2 1556 aaPredicted RBP29.33■■■□□ 2.29
UCHL3-201ENST00000377595 HMGXB3Q12766 1538 aa29.29■■■□□ 2.28
UCHL3-201ENST00000377595 ERCC6Q03468 1493 aa29.29■■■□□ 2.28
UCHL3-201ENST00000377595 BAZ1BQ9UIG0 1483 aaKnown RBP29.25■■■□□ 2.27
UCHL3-201ENST00000377595 DNAJC5Q9H3Z4 198 aa29.19■■■□□ 2.26
UCHL3-201ENST00000377595 MROH2BQ7Z745 1585 aa29.17■■■□□ 2.26
UCHL3-201ENST00000377595 NESP48681 1621 aa29.13■■■□□ 2.25
UCHL3-201ENST00000377595 CUX2O14529 1486 aa29.11■■■□□ 2.25
UCHL3-201ENST00000377595 PEG3Q9GZU2 1588 aa29.1■■■□□ 2.25
UCHL3-201ENST00000377595 AEBP2Q6ZN18 517 aaPredicted RBP29.06■■■□□ 2.24
UCHL3-201ENST00000377595 LAMC3Q9Y6N6 1575 aa28.84■■■□□ 2.21
UCHL3-201ENST00000377595 PDS5BQ9NTI5 1447 aa28.82■■■□□ 2.2
UCHL3-201ENST00000377595 CADPSQ9ULU8 1353 aa28.78■■■□□ 2.2
UCHL3-201ENST00000377595 WIZO95785 1651 aa28.77■■■□□ 2.2
UCHL3-201ENST00000377595 RSF1Q96T23 1441 aaPredicted RBP28.65■■■□□ 2.18
UCHL3-201ENST00000377595 THOC2Q8NI27 1593 aaKnown RBP28.65■■■□□ 2.18
UCHL3-201ENST00000377595 KIF21AQ7Z4S6 1674 aa28.59■■■□□ 2.17
UCHL3-201ENST00000377595 MRC2Q9UBG0 1479 aa28.48■■■□□ 2.15
UCHL3-201ENST00000377595 FANCD2Q9BXW9 1451 aa28.4■■■□□ 2.14
UCHL3-201ENST00000377595 TOP2AP11388 1531 aaKnown RBP28.4■■■□□ 2.14
UCHL3-201ENST00000377595 CFTRP13569 1480 aa28.4■■■□□ 2.14
UCHL3-201ENST00000377595 CEP164Q9UPV0 1460 aa28.4■■■□□ 2.14
UCHL3-201ENST00000377595 WDR62O43379 1518 aa28.34■■■□□ 2.13
UCHL3-201ENST00000377595 CCDC88BA6NC98 1476 aa28.2■■■□□ 2.1
UCHL3-201ENST00000377595 URB2Q14146 1524 aaKnown RBP28.13■■■□□ 2.09
UCHL3-201ENST00000377595 OSCARQ8IYS5 282 aa28.02■■■□□ 2.08
UCHL3-201ENST00000377595 TRIM41Q8WV44 630 aa28.02■■■□□ 2.08
UCHL3-201ENST00000377595 PRDM2Q13029 1718 aa27.84■■■□□ 2.05
UCHL3-201ENST00000377595 IFT140Q96RY7 1462 aa27.84■■■□□ 2.05
UCHL3-201ENST00000377595 TOPBP1Q92547 1522 aa27.84■■■□□ 2.05
UCHL3-201ENST00000377595 ABCC8Q09428 1581 aa27.82■■■□□ 2.04
UCHL3-201ENST00000377595 ZNF608Q9ULD9 1512 aaPredicted RBP27.81■■■□□ 2.04
UCHL3-201ENST00000377595 DNMBPQ6XZF7 1577 aa27.69■■■□□ 2.02
UCHL3-201ENST00000377595 SUPT5HO00267 1087 aaKnown RBP27.66■■■□□ 2.02
UCHL3-201ENST00000377595 AQRO60306 1485 aaKnown RBP eCLIP27.63■■■□□ 2.01
UCHL3-201ENST00000377595 FBLN2P98095 1184 aa27.58■■■□□ 2.01
UCHL3-201ENST00000377595 SOGA1O94964 1423 aa27.56■■■□□ 2
UCHL3-201ENST00000377595 POLA1P09884 1462 aaPredicted RBP27.56■■■□□ 2
UCHL3-201ENST00000377595 RAD54L2Q9Y4B4 1467 aa27.53■■■□□ 2
UCHL3-201ENST00000377595 EIF4G3O43432 1585 aaKnown RBP27.52■■■□□ 2
UCHL3-201ENST00000377595 TDRD9Q8NDG6 1382 aaKnown RBP27.51■■□□□ 1.99
UCHL3-201ENST00000377595 TARBP1Q13395 1621 aaKnown RBP27.51■■□□□ 1.99
UCHL3-201ENST00000377595 FGD5Q6ZNL6 1462 aa27.41■■□□□ 1.98
UCHL3-201ENST00000377595 RIMBP3CA6NJZ7 1639 aa27.39■■□□□ 1.98
UCHL3-201ENST00000377595 RIMBP3BA6NNM3 1639 aa27.39■■□□□ 1.98
UCHL3-201ENST00000377595 RIMBP3Q9UFD9 1639 aa27.39■■□□□ 1.98
UCHL3-201ENST00000377595 CYB5RLQ6IPT4 315 aa27.39■■□□□ 1.98
UCHL3-201ENST00000377595 CUX1P39880 1505 aa27.38■■□□□ 1.97
UCHL3-201ENST00000377595 ARHGEF11O15085 1522 aa27.36■■□□□ 1.97
UCHL3-201ENST00000377595 CHMP7Q8WUX9 453 aaPredicted RBP27.35■■□□□ 1.97
UCHL3-201ENST00000377595 CHIC1Q5VXU3 224 aa27.31■■□□□ 1.96
UCHL3-201ENST00000377595 CHD1O14646 1710 aa27.27■■□□□ 1.96
UCHL3-201ENST00000377595 SNAPC4Q5SXM2 1469 aa27.26■■□□□ 1.95
UCHL3-201ENST00000377595 GRIN2BQ13224 1484 aa27.23■■□□□ 1.95
UCHL3-201ENST00000377595 WDR97A6NE52 1622 aa27.18■■□□□ 1.94
UCHL3-201ENST00000377595 MAGI1Q96QZ7 1491 aaPredicted RBP27.17■■□□□ 1.94
UCHL3-201ENST00000377595 GAPVD1Q14C86 1478 aa27.16■■□□□ 1.94
UCHL3-201ENST00000377595 SYNJ2O15056 1496 aa27.11■■□□□ 1.93
UCHL3-201ENST00000377595 ARAP1Q96P48 1450 aa27.1■■□□□ 1.93
UCHL3-201ENST00000377595 ABCA10Q8WWZ4 1543 aa27.09■■□□□ 1.93
UCHL3-201ENST00000377595 WRNQ14191 1432 aaPredicted RBP eCLIP27.08■■□□□ 1.93
UCHL3-201ENST00000377595 TRHP20396 242 aaPredicted RBP27.08■■□□□ 1.93
UCHL3-201ENST00000377595 SYNJ1O43426 1573 aa27.05■■□□□ 1.92
UCHL3-201ENST00000377595 CLASP1Q7Z460 1538 aa27.01■■□□□ 1.91
UCHL3-201ENST00000377595 PBRM1Q86U86 1689 aa26.94■■□□□ 1.9
UCHL3-201ENST00000377595 ABCA5Q8WWZ7 1642 aa26.94■■□□□ 1.9
UCHL3-201ENST00000377595 TOP2BQ02880 1626 aa26.91■■□□□ 1.9
UCHL3-201ENST00000377595 BIVM-ERCC5R4GMW8 1640 aa26.86■■□□□ 1.89
UCHL3-201ENST00000377595 GRIN2AQ12879 1464 aa26.84■■□□□ 1.89
UCHL3-201ENST00000377595 FHAD1B1AJZ9 1412 aa26.82■■□□□ 1.88
UCHL3-201ENST00000377595 ADAMTS12P58397 1594 aa26.75■■□□□ 1.87
UCHL3-201ENST00000377595 NUP160Q12769 1436 aa26.74■■□□□ 1.87
UCHL3-201ENST00000377595 ERICH3Q5RHP9 1530 aa26.73■■□□□ 1.87
UCHL3-201ENST00000377595 CEP170Q5SW79 1584 aa26.69■■□□□ 1.86
UCHL3-201ENST00000377595 JPH4Q96JJ6 628 aa26.67■■□□□ 1.86
UCHL3-201ENST00000377595 ERCC6L2Q5T890 1561 aa26.66■■□□□ 1.86
UCHL3-201ENST00000377595 PRG4Q92954 1404 aaPredicted RBP26.58■■□□□ 1.85
UCHL3-201ENST00000377595 IGF1RP08069 1367 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms