Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TCRAP04437 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TCRAP04437 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
TCRAP04437 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC11.35□□□□□ -0.59
TCRAP04437 MIR940-201ENST00000401276 94 ntBASIC11.35□□□□□ -0.59
TCRAP04437 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC11.35□□□□□ -0.59
TCRAP04437 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TCRAP04437 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
TCRAP04437 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC11.35□□□□□ -0.59
TCRAP04437 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC11.35□□□□□ -0.59
TCRAP04437 AC051619.7-201ENST00000568314 623 ntBASIC11.35□□□□□ -0.59
TCRAP04437 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC11.35□□□□□ -0.59
TCRAP04437 GPX4-206ENST00000588919 803 ntTSL 2 BASIC11.35□□□□□ -0.59
TCRAP04437 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC11.35□□□□□ -0.59
TCRAP04437 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TCRAP04437 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
TCRAP04437 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TCRAP04437 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TCRAP04437 AC073548.1-201ENST00000624088 1882 ntBASIC11.35□□□□□ -0.59
TCRAP04437 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TCRAP04437 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
TCRAP04437 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TCRAP04437 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TCRAP04437 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
TCRAP04437 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC11.35□□□□□ -0.59
TCRAP04437 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
TCRAP04437 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
TCRAP04437 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC11.35□□□□□ -0.59
TCRAP04437 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC11.35□□□□□ -0.59
TCRAP04437 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TCRAP04437 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC11.35□□□□□ -0.59
TCRAP04437 TUBB3P1-201ENST00000405796 1332 ntBASIC11.35□□□□□ -0.59
TCRAP04437 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TCRAP04437 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TCRAP04437 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC11.34□□□□□ -0.59
TCRAP04437 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
TCRAP04437 AC027612.1-201ENST00000445234 2395 ntBASIC11.34□□□□□ -0.59
TCRAP04437 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
TCRAP04437 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TCRAP04437 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
TCRAP04437 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
TCRAP04437 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC11.34□□□□□ -0.59
TCRAP04437 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
TCRAP04437 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC11.34□□□□□ -0.59
TCRAP04437 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TCRAP04437 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TCRAP04437 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TCRAP04437 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TCRAP04437 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TCRAP04437 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
TCRAP04437 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
TCRAP04437 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TCRAP04437 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
TCRAP04437 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
TCRAP04437 TEX30-205ENST00000376029 959 ntTSL 2 BASIC11.34□□□□□ -0.59
TCRAP04437 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC11.34□□□□□ -0.59
TCRAP04437 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TCRAP04437 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC11.34□□□□□ -0.59
TCRAP04437 AL353779.1-201ENST00000434793 351 ntBASIC11.34□□□□□ -0.59
TCRAP04437 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TCRAP04437 HLA-V-204ENST00000476601 1289 ntBASIC11.34□□□□□ -0.59
TCRAP04437 AP000344.2-201ENST00000512987 629 ntBASIC11.34□□□□□ -0.59
TCRAP04437 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC11.34□□□□□ -0.59
TCRAP04437 AC010336.2-201ENST00000564226 506 ntBASIC11.34□□□□□ -0.59
TCRAP04437 AC005829.1-201ENST00000570002 483 ntBASIC11.34□□□□□ -0.59
TCRAP04437 KLK8-205ENST00000593490 267 ntTSL 3 BASIC11.34□□□□□ -0.59
TCRAP04437 AC092364.2-202ENST00000597012 1073 ntBASIC11.34□□□□□ -0.59
TCRAP04437 AC004835.2-201ENST00000603762 682 ntBASIC11.34□□□□□ -0.59
TCRAP04437 AP001059.3-201ENST00000619053 235 ntBASIC11.34□□□□□ -0.59
TCRAP04437 NME4-212ENST00000621774 904 ntTSL 3 BASIC11.34□□□□□ -0.59
TCRAP04437 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC11.34□□□□□ -0.59
TCRAP04437 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TCRAP04437 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC11.34□□□□□ -0.59
TCRAP04437 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TCRAP04437 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC11.34□□□□□ -0.59
TCRAP04437 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
TCRAP04437 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
TCRAP04437 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
TCRAP04437 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
TCRAP04437 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
TCRAP04437 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
TCRAP04437 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TCRAP04437 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TCRAP04437 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TCRAP04437 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
TCRAP04437 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TCRAP04437 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TCRAP04437 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
TCRAP04437 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TCRAP04437 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC11.34□□□□□ -0.59
TCRAP04437 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
TCRAP04437 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
TCRAP04437 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.59
TCRAP04437 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
TCRAP04437 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
TCRAP04437 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC11.33□□□□□ -0.6
TCRAP04437 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TCRAP04437 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms