Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
DNMT3BQ9UBC3 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 AC098935.1-201ENST00000446057 611 ntBASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 AC104784.1-201ENST00000473096 294 ntBASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 RN7SL67P-201ENST00000492147 296 ntBASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 RBM8B-201ENST00000555532 525 ntBASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 AP003419.4-201ENST00000616071 517 ntBASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 AC091951.1-201ENST00000512854 2465 ntBASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
DNMT3BQ9UBC3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 TMBIM7P-202ENST00000641474 1516 ntBASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 CAP2P1-201ENST00000557743 1390 ntBASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 NCR3-202ENST00000376071 541 ntTSL 5 BASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 LBH-202ENST00000401506 485 ntTSL 3 BASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 AC026320.2-201ENST00000434379 478 ntBASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 AC008723.1-201ENST00000506922 207 ntBASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 AC103810.10-201ENST00000606504 343 ntBASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 MIR6769A-201ENST00000617340 73 ntBASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 AC051619.9-201ENST00000623237 597 ntBASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 AL805961.1-201ENST00000642026 753 ntBASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.38■□□□□ 0.05
DNMT3BQ9UBC3 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms