RNA–Protein interactions for RNA: ENST00000376071.4

NCR3-202, Transcript of natural cytotoxicity triggering receptor 3, humanhuman

TSL 5 BASIC

Gene NCR3, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCR3-202ENST00000376071 NISCHQ9Y2I1 1504 aa34.82■■■■□ 3.16
NCR3-202ENST00000376071 CCDC180Q9P1Z9 1646 aa31.01■■■□□ 2.55
NCR3-202ENST00000376071 ABCC9O60706 1549 aa30.28■■■□□ 2.44
NCR3-202ENST00000376071 RB1CC1Q8TDY2 1594 aa29.18■■■□□ 2.26
NCR3-202ENST00000376071 NACADO15069 1562 aa29.13■■■□□ 2.25
NCR3-202ENST00000376071 DCAF8L2P0C7V8 631 aa29.11■■■□□ 2.25
NCR3-202ENST00000376071 ZCCHC6Q5VYS8 1495 aaKnown RBP29.02■■■□□ 2.24
NCR3-202ENST00000376071 MYO15BQ96JP2 1530 aa28.94■■■□□ 2.22
NCR3-202ENST00000376071 DCAF1Q9Y4B6 1507 aa28.83■■■□□ 2.21
NCR3-202ENST00000376071 UNC13AQ9UPW8 1703 aa28.48■■■□□ 2.15
NCR3-202ENST00000376071 SCRIBQ14160 1630 aa28.28■■■□□ 2.12
NCR3-202ENST00000376071 PABPN1Q86U42 306 aaKnown RBP eCLIP28.26■■■□□ 2.11
NCR3-202ENST00000376071 BICRAQ9NZM4 1560 aa28.22■■■□□ 2.11
NCR3-202ENST00000376071 SHROOM4Q9ULL8 1493 aa28.01■■■□□ 2.07
NCR3-202ENST00000376071 DNAJC5BQ9UF47 199 aa27.68■■■□□ 2.02
NCR3-202ENST00000376071 EIF4G1Q04637 1599 aaKnown RBP27.52■■■□□ 2
NCR3-202ENST00000376071 CC2D2AQ9P2K1 1620 aa27.4■■□□□ 1.98
NCR3-202ENST00000376071 CECR2Q9BXF3 1484 aa27.22■■□□□ 1.95
NCR3-202ENST00000376071 SMARCA4P51532 1647 aa27.04■■□□□ 1.92
NCR3-202ENST00000376071 BAZ1AQ9NRL2 1556 aaPredicted RBP27.03■■□□□ 1.92
NCR3-202ENST00000376071 SMARCA2P51531 1590 aa26.88■■□□□ 1.89
NCR3-202ENST00000376071 ATAD2BQ9ULI0 1458 aa26.86■■□□□ 1.89
NCR3-202ENST00000376071 NCAPD3P42695 1498 aa26.84■■□□□ 1.89
NCR3-202ENST00000376071 MROH2BQ7Z745 1585 aa26.82■■□□□ 1.88
NCR3-202ENST00000376071 PEG3Q9GZU2 1588 aa26.75■■□□□ 1.87
NCR3-202ENST00000376071 HMGXB3Q12766 1538 aa26.75■■□□□ 1.87
NCR3-202ENST00000376071 BAZ1BQ9UIG0 1483 aaKnown RBP26.68■■□□□ 1.86
NCR3-202ENST00000376071 WIZO95785 1651 aa26.55■■□□□ 1.84
NCR3-202ENST00000376071 RSF1Q96T23 1441 aaPredicted RBP26.51■■□□□ 1.83
NCR3-202ENST00000376071 TOP2AP11388 1531 aaKnown RBP26.29■■□□□ 1.8
NCR3-202ENST00000376071 NESP48681 1621 aa26.18■■□□□ 1.78
NCR3-202ENST00000376071 LAMC3Q9Y6N6 1575 aa26.18■■□□□ 1.78
NCR3-202ENST00000376071 ERCC6Q03468 1493 aa26.16■■□□□ 1.78
NCR3-202ENST00000376071 CADPSQ9ULU8 1353 aa26.07■■□□□ 1.76
NCR3-202ENST00000376071 PDS5BQ9NTI5 1447 aa26■■□□□ 1.75
NCR3-202ENST00000376071 CCDC88BA6NC98 1476 aa25.95■■□□□ 1.74
NCR3-202ENST00000376071 KIF21AQ7Z4S6 1674 aa25.92■■□□□ 1.74
NCR3-202ENST00000376071 CFTRP13569 1480 aa25.91■■□□□ 1.74
NCR3-202ENST00000376071 SUPT5HO00267 1087 aaKnown RBP25.88■■□□□ 1.73
NCR3-202ENST00000376071 CUX2O14529 1486 aa25.85■■□□□ 1.73
NCR3-202ENST00000376071 THOC2Q8NI27 1593 aaKnown RBP25.82■■□□□ 1.72
NCR3-202ENST00000376071 PRDM2Q13029 1718 aa25.79■■□□□ 1.72
NCR3-202ENST00000376071 FANCD2Q9BXW9 1451 aa25.79■■□□□ 1.72
NCR3-202ENST00000376071 CEP164Q9UPV0 1460 aa25.79■■□□□ 1.72
NCR3-202ENST00000376071 MRC2Q9UBG0 1479 aa25.72■■□□□ 1.71
NCR3-202ENST00000376071 WDR62O43379 1518 aa25.63■■□□□ 1.69
NCR3-202ENST00000376071 URB2Q14146 1524 aaKnown RBP25.5■■□□□ 1.67
NCR3-202ENST00000376071 ABCC8Q09428 1581 aa25.41■■□□□ 1.66
NCR3-202ENST00000376071 TOPBP1Q92547 1522 aa25.37■■□□□ 1.65
NCR3-202ENST00000376071 DNMBPQ6XZF7 1577 aa25.36■■□□□ 1.65
NCR3-202ENST00000376071 IFT140Q96RY7 1462 aa25.22■■□□□ 1.63
NCR3-202ENST00000376071 CUX1P39880 1505 aa25.17■■□□□ 1.62
NCR3-202ENST00000376071 POLA1P09884 1462 aaPredicted RBP25.15■■□□□ 1.62
NCR3-202ENST00000376071 FGD5Q6ZNL6 1462 aa25.1■■□□□ 1.61
NCR3-202ENST00000376071 TARBP1Q13395 1621 aaKnown RBP25.08■■□□□ 1.61
NCR3-202ENST00000376071 ZNF608Q9ULD9 1512 aaPredicted RBP25.07■■□□□ 1.6
NCR3-202ENST00000376071 SOGA1O94964 1423 aa25.05■■□□□ 1.6
NCR3-202ENST00000376071 WRNQ14191 1432 aaPredicted RBP eCLIP25.03■■□□□ 1.6
NCR3-202ENST00000376071 RAD54L2Q9Y4B4 1467 aa25.02■■□□□ 1.6
NCR3-202ENST00000376071 EIF4G3O43432 1585 aaKnown RBP25.02■■□□□ 1.6
NCR3-202ENST00000376071 TOP2BQ02880 1626 aa24.99■■□□□ 1.59
NCR3-202ENST00000376071 BIVM-ERCC5R4GMW8 1640 aa24.98■■□□□ 1.59
NCR3-202ENST00000376071 DNAJC5Q9H3Z4 198 aa24.97■■□□□ 1.59
NCR3-202ENST00000376071 SYNJ1O43426 1573 aa24.96■■□□□ 1.59
NCR3-202ENST00000376071 WDR97A6NE52 1622 aa24.95■■□□□ 1.58
NCR3-202ENST00000376071 AQRO60306 1485 aaKnown RBP eCLIP24.94■■□□□ 1.58
NCR3-202ENST00000376071 TDRD9Q8NDG6 1382 aaKnown RBP24.89■■□□□ 1.57
NCR3-202ENST00000376071 ABCA10Q8WWZ4 1543 aa24.86■■□□□ 1.57
NCR3-202ENST00000376071 GRIN2BQ13224 1484 aa24.78■■□□□ 1.56
NCR3-202ENST00000376071 GAPVD1Q14C86 1478 aa24.77■■□□□ 1.56
NCR3-202ENST00000376071 ABCA5Q8WWZ7 1642 aa24.77■■□□□ 1.56
NCR3-202ENST00000376071 OSCARQ8IYS5 282 aa24.76■■□□□ 1.55
NCR3-202ENST00000376071 PBRM1Q86U86 1689 aa24.75■■□□□ 1.55
NCR3-202ENST00000376071 SNAPC4Q5SXM2 1469 aa24.74■■□□□ 1.55
NCR3-202ENST00000376071 MAGI1Q96QZ7 1491 aaPredicted RBP24.72■■□□□ 1.55
NCR3-202ENST00000376071 CHD1O14646 1710 aa24.7■■□□□ 1.54
NCR3-202ENST00000376071 FBLN2P98095 1184 aa24.68■■□□□ 1.54
NCR3-202ENST00000376071 SYNJ2O15056 1496 aa24.62■■□□□ 1.53
NCR3-202ENST00000376071 CHMP7Q8WUX9 453 aaPredicted RBP24.61■■□□□ 1.53
NCR3-202ENST00000376071 ERICH3Q5RHP9 1530 aa24.58■■□□□ 1.53
NCR3-202ENST00000376071 ADAMTS12P58397 1594 aa24.54■■□□□ 1.52
NCR3-202ENST00000376071 KIF27Q86VH2 1401 aa24.53■■□□□ 1.52
NCR3-202ENST00000376071 FHAD1B1AJZ9 1412 aa24.49■■□□□ 1.51
NCR3-202ENST00000376071 TRIM41Q8WV44 630 aa24.47■■□□□ 1.51
NCR3-202ENST00000376071 GRIN2AQ12879 1464 aa24.45■■□□□ 1.51
NCR3-202ENST00000376071 CLASP1Q7Z460 1538 aa24.4■■□□□ 1.5
NCR3-202ENST00000376071 CUL7Q14999 1698 aa24.39■■□□□ 1.49
NCR3-202ENST00000376071 RIMBP3CA6NJZ7 1639 aa24.37■■□□□ 1.49
NCR3-202ENST00000376071 RIMBP3BA6NNM3 1639 aa24.37■■□□□ 1.49
NCR3-202ENST00000376071 RIMBP3Q9UFD9 1639 aa24.37■■□□□ 1.49
NCR3-202ENST00000376071 ARHGEF11O15085 1522 aa24.36■■□□□ 1.49
NCR3-202ENST00000376071 IGF1RP08069 1367 aa24.36■■□□□ 1.49
NCR3-202ENST00000376071 NUP160Q12769 1436 aa24.32■■□□□ 1.48
NCR3-202ENST00000376071 CEP170Q5SW79 1584 aa24.32■■□□□ 1.48
NCR3-202ENST00000376071 CARMIL1Q5VZK9 1371 aa24.25■■□□□ 1.47
NCR3-202ENST00000376071 RUSC2Q8N2Y8 1516 aa24.24■■□□□ 1.47
NCR3-202ENST00000376071 ARAP1Q96P48 1450 aa24.15■■□□□ 1.46
NCR3-202ENST00000376071 SHROOM2Q13796 1616 aa24.15■■□□□ 1.46
NCR3-202ENST00000376071 RAPGEF2Q9Y4G8 1499 aa24.13■■□□□ 1.45
NCR3-202ENST00000376071 CYB5RLQ6IPT4 315 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms