Protein–RNA interactions for Protein: Q8N7C7

RNF148, RING finger protein 148, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF148Q8N7C7 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.3□□□□□ -0.12
RNF148Q8N7C7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
RNF148Q8N7C7 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.3□□□□□ -0.12
RNF148Q8N7C7 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.3□□□□□ -0.12
RNF148Q8N7C7 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.3□□□□□ -0.12
RNF148Q8N7C7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.3□□□□□ -0.12
RNF148Q8N7C7 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.3□□□□□ -0.12
RNF148Q8N7C7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.3□□□□□ -0.12
RNF148Q8N7C7 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RNF148Q8N7C7 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RNF148Q8N7C7 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
RNF148Q8N7C7 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RNF148Q8N7C7 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RNF148Q8N7C7 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.3□□□□□ -0.12
RNF148Q8N7C7 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RNF148Q8N7C7 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
RNF148Q8N7C7 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RNF148Q8N7C7 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RNF148Q8N7C7 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RNF148Q8N7C7 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RNF148Q8N7C7 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RNF148Q8N7C7 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
RNF148Q8N7C7 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RNF148Q8N7C7 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RNF148Q8N7C7 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RNF148Q8N7C7 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RNF148Q8N7C7 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RNF148Q8N7C7 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 AL590627.1-203ENST00000421194 1026 ntBASIC14.29□□□□□ -0.12
RNF148Q8N7C7 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 ACTG1P14-201ENST00000446382 1122 ntBASIC14.29□□□□□ -0.12
RNF148Q8N7C7 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 AC074044.1-201ENST00000609673 707 ntBASIC14.29□□□□□ -0.12
RNF148Q8N7C7 AL033527.5-202ENST00000641632 1098 ntBASIC14.29□□□□□ -0.12
RNF148Q8N7C7 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 AL035456.1-201ENST00000456064 1369 ntBASIC14.29□□□□□ -0.12
RNF148Q8N7C7 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 AL445209.1-201ENST00000607269 3491 ntBASIC14.29□□□□□ -0.12
RNF148Q8N7C7 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 PEG13-201ENST00000631594 5667 ntBASIC14.29□□□□□ -0.12
RNF148Q8N7C7 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.29□□□□□ -0.12
RNF148Q8N7C7 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RNF148Q8N7C7 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF148Q8N7C7 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF148Q8N7C7 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF148Q8N7C7 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF148Q8N7C7 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC14.28□□□□□ -0.12
RNF148Q8N7C7 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF148Q8N7C7 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNF148Q8N7C7 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.28□□□□□ -0.12
RNF148Q8N7C7 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNF148Q8N7C7 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RNF148Q8N7C7 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF148Q8N7C7 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF148Q8N7C7 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
RNF148Q8N7C7 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
RNF148Q8N7C7 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF148Q8N7C7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF148Q8N7C7 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
RNF148Q8N7C7 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.28□□□□□ -0.12
RNF148Q8N7C7 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF148Q8N7C7 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms