RNA–Protein interactions for RNA: ENST00000262519.13

SETD1A-201, Transcript of SET domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SETD1A, Length 6,451 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETD1A-201ENST00000262519 DCAF8L2P0C7V8 631 aa24.3■■□□□ 1.48
SETD1A-201ENST00000262519 EHMT2Q96KQ7 1210 aa22.98■■□□□ 1.27
SETD1A-201ENST00000262519 SUPT5HO00267 1087 aaKnown RBP22.69■■□□□ 1.22
SETD1A-201ENST00000262519 PELP1Q8IZL8 1130 aaKnown RBP22.31■■□□□ 1.16
SETD1A-201ENST00000262519 TTBK1Q5TCY1 1321 aaPredicted RBP22.14■■□□□ 1.14
SETD1A-201ENST00000262519 SHROOM4Q9ULL8 1493 aa22.08■■□□□ 1.13
SETD1A-201ENST00000262519 APLP2Q06481 763 aa21.92■■□□□ 1.1
SETD1A-201ENST00000262519 ERICH6Q7L0X2 663 aa21.86■■□□□ 1.09
SETD1A-201ENST00000262519 RANGAP1P46060 587 aaPredicted RBP21.79■■□□□ 1.08
SETD1A-201ENST00000262519 FAM9AQ8IZU1 332 aaPredicted RBP21.73■■□□□ 1.07
SETD1A-201ENST00000262519 ATP1B4Q9UN42 357 aaPredicted RBP21.57■■□□□ 1.04
SETD1A-201ENST00000262519 PCGF6Q9BYE7 350 aa21.52■■□□□ 1.04
SETD1A-201ENST00000262519 CCER1Q8TC90 406 aaPredicted RBP21.36■■□□□ 1.01
SETD1A-201ENST00000262519 MYT1Q01538 1121 aa21.35■■□□□ 1.01
SETD1A-201ENST00000262519 YTHDC1Q96MU7 727 aaKnown RBP21.25■□□□□ 0.99
SETD1A-201ENST00000262519 CENPBP07199 599 aaPredicted RBP21.13■□□□□ 0.97
SETD1A-201ENST00000262519 NEFLP07196 543 aa21.02■□□□□ 0.96
SETD1A-201ENST00000262519 CNGB1Q14028 1251 aaPredicted RBP20.95■□□□□ 0.94
SETD1A-201ENST00000262519 POLR3GLQ9BT43 218 aa20.94■□□□□ 0.94
SETD1A-201ENST00000262519 MYT1LQ9UL68 1186 aa20.94■□□□□ 0.94
SETD1A-201ENST00000262519 CHIC1Q5VXU3 224 aa20.93■□□□□ 0.94
SETD1A-201ENST00000262519 PPARGC1BQ86YN6 1023 aaKnown RBP20.87■□□□□ 0.93
SETD1A-201ENST00000262519 UBTFP17480 764 aaKnown RBP20.82■□□□□ 0.92
SETD1A-201ENST00000262519 DAXXQ9UER7 740 aaPredicted RBP20.79■□□□□ 0.92
SETD1A-201ENST00000262519 TRIM41Q8WV44 630 aa20.68■□□□□ 0.9
SETD1A-201ENST00000262519 SLC4A1APQ9BWU0 796 aaKnown RBP20.65■□□□□ 0.9
SETD1A-201ENST00000262519 ITGAEP38570 1179 aa20.63■□□□□ 0.89
SETD1A-201ENST00000262519 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.61■□□□□ 0.89
SETD1A-201ENST00000262519 HNRNPUL2Q1KMD3 747 aaKnown RBP20.61■□□□□ 0.89
SETD1A-201ENST00000262519 ZEB1P37275 1124 aaPredicted RBP20.54■□□□□ 0.88
SETD1A-201ENST00000262519 CLSPNQ9HAW4 1339 aa20.34■□□□□ 0.85
SETD1A-201ENST00000262519 BCL11AQ9H165 835 aa20.29■□□□□ 0.84
SETD1A-201ENST00000262519 ZNF316A6NFI3 1004 aaPredicted RBP20.28■□□□□ 0.84
SETD1A-201ENST00000262519 NISCHQ9Y2I1 1504 aa20.22■□□□□ 0.83
SETD1A-201ENST00000262519 SLC24A1O60721 1099 aa20.13■□□□□ 0.81
SETD1A-201ENST00000262519 RTL5Q5HYW3 569 aaPredicted RBP20.09■□□□□ 0.81
SETD1A-201ENST00000262519 BCANQ96GW7 911 aa19.94■□□□□ 0.78
SETD1A-201ENST00000262519 HRCP23327 699 aa19.87■□□□□ 0.77
SETD1A-201ENST00000262519 ZNF326Q5BKZ1 582 aaKnown RBP19.83■□□□□ 0.77
SETD1A-201ENST00000262519 ZBTB47Q9UFB7 747 aaPredicted RBP19.82■□□□□ 0.76
SETD1A-201ENST00000262519 TRIM26Q12899 539 aaPredicted RBP19.82■□□□□ 0.76
SETD1A-201ENST00000262519 TRIM52Q96A61 297 aa19.81■□□□□ 0.76
SETD1A-201ENST00000262519 FAM50AQ14320 339 aaKnown RBP19.78■□□□□ 0.76
SETD1A-201ENST00000262519 NEUROD1Q13562 356 aa19.77■□□□□ 0.76
SETD1A-201ENST00000262519 LOC105371045A0A1W2PR82 267 aa19.75■□□□□ 0.75
SETD1A-201ENST00000262519 CANXP27824 592 aaKnown RBP19.67■□□□□ 0.74
SETD1A-201ENST00000262519 PLPPR3Q6T4P5 718 aa19.67■□□□□ 0.74
SETD1A-201ENST00000262519 DIEXFQ68CQ4 756 aaKnown RBP19.56■□□□□ 0.72
SETD1A-201ENST00000262519 FBLN2P98095 1184 aa19.51■□□□□ 0.71
SETD1A-201ENST00000262519 NPM2Q86SE8 214 aaKnown RBP19.5■□□□□ 0.71
SETD1A-201ENST00000262519 ARID3CA6NKF2 412 aa19.49■□□□□ 0.71
SETD1A-201ENST00000262519 CDK11AQ9UQ88 783 aaPredicted RBP19.44■□□□□ 0.7
SETD1A-201ENST00000262519 NEFMP07197 916 aa19.41■□□□□ 0.7
SETD1A-201ENST00000262519 EIF5BO60841 1220 aaKnown RBP19.38■□□□□ 0.69
SETD1A-201ENST00000262519 ANP32CO43423 234 aa19.36■□□□□ 0.69
SETD1A-201ENST00000262519 GTF3C3Q9Y5Q9 886 aa19.32■□□□□ 0.68
SETD1A-201ENST00000262519 A0A0G2JS52 829 aa19.29■□□□□ 0.68
SETD1A-201ENST00000262519 ARXQ96QS3 562 aa19.29■□□□□ 0.68
SETD1A-201ENST00000262519 PLEKHG5O94827 1062 aa19.25■□□□□ 0.67
SETD1A-201ENST00000262519 HSP90AA1P07900 732 aaKnown RBP19.25■□□□□ 0.67
SETD1A-201ENST00000262519 SCAF1Q9H7N4 1312 aaKnown RBP19.22■□□□□ 0.67
SETD1A-201ENST00000262519 CHGAP10645 457 aaKnown RBP19.21■□□□□ 0.67
SETD1A-201ENST00000262519 ZNF777Q9ULD5 760 aaPredicted RBP19.21■□□□□ 0.67
SETD1A-201ENST00000262519 P3H3Q8IVL6 736 aa19.19■□□□□ 0.66
SETD1A-201ENST00000262519 SALL2Q9Y467 1007 aaPredicted RBP19.18■□□□□ 0.66
SETD1A-201ENST00000262519 ANP32AP39687 249 aaKnown RBP19.17■□□□□ 0.66
SETD1A-201ENST00000262519 SENP3Q9H4L4 574 aaPredicted RBP19.15■□□□□ 0.66
SETD1A-201ENST00000262519 ANP32BQ92688 251 aaKnown RBP19.14■□□□□ 0.65
SETD1A-201ENST00000262519 ESF1Q9H501 851 aaKnown RBP19.13■□□□□ 0.65
SETD1A-201ENST00000262519 STAG3Q9UJ98 1225 aa19.13■□□□□ 0.65
SETD1A-201ENST00000262519 PABPN1Q86U42 306 aaKnown RBP eCLIP19.1■□□□□ 0.65
SETD1A-201ENST00000262519 TULP1O00294 542 aaPredicted RBP19.07■□□□□ 0.64
SETD1A-201ENST00000262519 ZBTB7CA1YPR0 619 aa19.06■□□□□ 0.64
SETD1A-201ENST00000262519 NBR1Q14596 966 aa18.98■□□□□ 0.63
SETD1A-201ENST00000262519 CDK11BP21127 795 aaKnown RBP18.97■□□□□ 0.63
SETD1A-201ENST00000262519 FAM9BQ8IZU0 186 aa18.92■□□□□ 0.62
SETD1A-201ENST00000262519 FKBP8Q14318 412 aa18.91■□□□□ 0.62
SETD1A-201ENST00000262519 TPRNQ4KMQ1 711 aa18.91■□□□□ 0.62
SETD1A-201ENST00000262519 UPF2Q9HAU5 1272 aaKnown RBP18.9■□□□□ 0.62
SETD1A-201ENST00000262519 C14orf37Q86TY3 774 aa18.84■□□□□ 0.61
SETD1A-201ENST00000262519 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.84■□□□□ 0.611e-6■■■□□ 17.1
SETD1A-201ENST00000262519 TAOK2Q9UL54 1235 aa18.83■□□□□ 0.6
SETD1A-201ENST00000262519 NCBP3Q53F19 620 aaKnown RBP18.81■□□□□ 0.6
SETD1A-201ENST00000262519 HNRNPUQ00839 825 aaKnown RBP eCLIP18.8■□□□□ 0.6
SETD1A-201ENST00000262519 IRX6P78412 446 aaPredicted RBP18.74■□□□□ 0.59
SETD1A-201ENST00000262519 SENP3-EIF4A1A0A087X0R7 540 aa18.74■□□□□ 0.59
SETD1A-201ENST00000262519 KDM2AQ9Y2K7 1162 aa18.7■□□□□ 0.58
SETD1A-201ENST00000262519 GLIPR1L2Q4G1C9 344 aa18.7■□□□□ 0.58
SETD1A-201ENST00000262519 DDX10Q13206 875 aaKnown RBP18.67■□□□□ 0.58
SETD1A-201ENST00000262519 CCDC136Q96JN2 1154 aa18.66■□□□□ 0.58
SETD1A-201ENST00000262519 CHIC2Q9UKJ5 165 aa18.66■□□□□ 0.58
SETD1A-201ENST00000262519 WDR43Q15061 677 aaKnown RBP eCLIP18.65■□□□□ 0.58
SETD1A-201ENST00000262519 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.65■□□□□ 0.58
SETD1A-201ENST00000262519 ACIN1Q9UKV3 1341 aaKnown RBP18.64■□□□□ 0.57
SETD1A-201ENST00000262519 HAP1P54257 671 aaPredicted RBP18.62■□□□□ 0.57
SETD1A-201ENST00000262519 NPM1P06748 294 aaKnown RBP eCLIP18.62■□□□□ 0.57
SETD1A-201ENST00000262519 NCLP19338 710 aaKnown RBP18.62■□□□□ 0.57
SETD1A-201ENST00000262519 TMC1Q8TDI8 760 aa18.62■□□□□ 0.57
SETD1A-201ENST00000262519 MYH16Q9H6N6 1097 aa18.61■□□□□ 0.57
SETD1A-201ENST00000262519 TONSLQ96HA7 1378 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms