Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.11□□□□□ -0.31
ATF1P18846 IGHV3-42-201ENST00000520410 361 ntBASIC13.11□□□□□ -0.31
ATF1P18846 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.11□□□□□ -0.31
ATF1P18846 AL691403.2-201ENST00000618460 490 ntBASIC13.11□□□□□ -0.31
ATF1P18846 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.11□□□□□ -0.31
ATF1P18846 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATF1P18846 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
ATF1P18846 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
ATF1P18846 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.11□□□□□ -0.31
ATF1P18846 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATF1P18846 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATF1P18846 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.11□□□□□ -0.31
ATF1P18846 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATF1P18846 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ATF1P18846 AC023794.5-201ENST00000564380 2157 ntBASIC13.11□□□□□ -0.31
ATF1P18846 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATF1P18846 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.11□□□□□ -0.31
ATF1P18846 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATF1P18846 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ATF1P18846 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
ATF1P18846 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.11□□□□□ -0.31
ATF1P18846 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATF1P18846 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ATF1P18846 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ATF1P18846 BTBD7P1-201ENST00000447253 1453 ntBASIC13.1□□□□□ -0.31
ATF1P18846 AC020910.6-201ENST00000623084 1459 ntBASIC13.1□□□□□ -0.31
ATF1P18846 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATF1P18846 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
ATF1P18846 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.1□□□□□ -0.31
ATF1P18846 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.1□□□□□ -0.31
ATF1P18846 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.1□□□□□ -0.31
ATF1P18846 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.1□□□□□ -0.31
ATF1P18846 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
ATF1P18846 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.1□□□□□ -0.31
ATF1P18846 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATF1P18846 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ATF1P18846 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ATF1P18846 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.1□□□□□ -0.31
ATF1P18846 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATF1P18846 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.1□□□□□ -0.31
ATF1P18846 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ATF1P18846 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ATF1P18846 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.1□□□□□ -0.31
ATF1P18846 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATF1P18846 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.1□□□□□ -0.31
ATF1P18846 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
ATF1P18846 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATF1P18846 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATF1P18846 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ATF1P18846 MIR943-201ENST00000401286 94 ntBASIC13.1□□□□□ -0.31
ATF1P18846 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.1□□□□□ -0.31
ATF1P18846 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.1□□□□□ -0.31
ATF1P18846 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ATF1P18846 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.1□□□□□ -0.31
ATF1P18846 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.1□□□□□ -0.31
ATF1P18846 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.1□□□□□ -0.31
ATF1P18846 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.1□□□□□ -0.31
ATF1P18846 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.1□□□□□ -0.31
ATF1P18846 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.1□□□□□ -0.31
ATF1P18846 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.1□□□□□ -0.31
ATF1P18846 AC093028.1-201ENST00000622998 982 ntBASIC13.1□□□□□ -0.31
ATF1P18846 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ATF1P18846 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATF1P18846 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ATF1P18846 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.1□□□□□ -0.31
ATF1P18846 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.1□□□□□ -0.31
ATF1P18846 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ATF1P18846 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
ATF1P18846 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.1□□□□□ -0.31
ATF1P18846 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
ATF1P18846 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATF1P18846 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ATF1P18846 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATF1P18846 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATF1P18846 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATF1P18846 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATF1P18846 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
ATF1P18846 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.1□□□□□ -0.31
ATF1P18846 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.1□□□□□ -0.31
ATF1P18846 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ATF1P18846 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATF1P18846 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ATF1P18846 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ATF1P18846 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATF1P18846 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
ATF1P18846 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.09□□□□□ -0.31
ATF1P18846 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ATF1P18846 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ATF1P18846 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATF1P18846 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATF1P18846 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATF1P18846 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATF1P18846 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATF1P18846 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATF1P18846 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATF1P18846 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
ATF1P18846 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATF1P18846 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATF1P18846 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ATF1P18846 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms