Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CCDC107Q8WV48 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.97□□□□□ -0.33
CCDC107Q8WV48 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 PPT1-213ENST00000641319 2388 ntBASIC12.97□□□□□ -0.33
CCDC107Q8WV48 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 AL139400.1-201ENST00000366220 510 ntBASIC12.97□□□□□ -0.33
CCDC107Q8WV48 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 AC125807.1-201ENST00000483097 614 ntBASIC12.97□□□□□ -0.33
CCDC107Q8WV48 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 AC025048.3-201ENST00000590609 569 ntBASIC12.97□□□□□ -0.33
CCDC107Q8WV48 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 LINC01115-203ENST00000606068 577 ntBASIC12.97□□□□□ -0.33
CCDC107Q8WV48 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 AC005702.4-201ENST00000618393 416 ntBASIC12.97□□□□□ -0.33
CCDC107Q8WV48 AL691403.2-201ENST00000618460 490 ntBASIC12.97□□□□□ -0.33
CCDC107Q8WV48 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 AC012508.2-201ENST00000567613 1472 ntBASIC12.97□□□□□ -0.33
CCDC107Q8WV48 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 DGCR9-201ENST00000609630 2415 ntBASIC12.97□□□□□ -0.33
CCDC107Q8WV48 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.97□□□□□ -0.33
CCDC107Q8WV48 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCDC107Q8WV48 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.96□□□□□ -0.33
CCDC107Q8WV48 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCDC107Q8WV48 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
CCDC107Q8WV48 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCDC107Q8WV48 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCDC107Q8WV48 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCDC107Q8WV48 Z97205.2-201ENST00000564697 1639 ntBASIC12.96□□□□□ -0.33
CCDC107Q8WV48 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCDC107Q8WV48 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CCDC107Q8WV48 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCDC107Q8WV48 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCDC107Q8WV48 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
CCDC107Q8WV48 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
CCDC107Q8WV48 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCDC107Q8WV48 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCDC107Q8WV48 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms