Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 ZNF250-202ENST00000417550 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 RBMY2AP-201ENST00000445405 1157 ntBASIC8.94□□□□□ -0.98
SVIPQ8NHG7 RBMY2CP-201ENST00000448575 1157 ntBASIC8.94□□□□□ -0.98
SVIPQ8NHG7 RBMY2DP-202ENST00000448881 1157 ntBASIC8.94□□□□□ -0.98
SVIPQ8NHG7 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 GNGT2-204ENST00000511277 918 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 AC137695.1-201ENST00000604126 489 ntBASIC8.94□□□□□ -0.98
SVIPQ8NHG7 AC010809.3-201ENST00000621310 641 ntBASIC8.94□□□□□ -0.98
SVIPQ8NHG7 LINC01943-201ENST00000625410 559 ntTSL 2 BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 YEATS2-201ENST00000305135 6506 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 LRP1-202ENST00000338962 2169 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 VIT-204ENST00000401530 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 ZBTB44-205ENST00000525842 9315 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 PRPF40A-202ENST00000410080 8048 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 LYSMD1-201ENST00000368908 2479 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 MEIS2-211ENST00000559085 2538 ntTSL 2 BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 SSBP2-212ENST00000509053 1534 ntTSL 2 BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 SEMA4G-202ENST00000370250 3596 ntAPPRIS ALT1 TSL 5 BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 PDYN-201ENST00000217305 2555 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 SLC36A1-201ENST00000243389 5781 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 GTF3C1-201ENST00000356183 7018 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 SGCG-201ENST00000218867 1624 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 ZNF181-201ENST00000392232 2791 ntTSL 5 BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 AC116353.5-201ENST00000638148 1699 ntBASIC8.94□□□□□ -0.98
SVIPQ8NHG7 MAT2A-201ENST00000306434 2819 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 SUPT7L-204ENST00000406540 2869 ntAPPRIS ALT1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 AL591848.3-201ENST00000570141 2968 ntBASIC8.94□□□□□ -0.98
SVIPQ8NHG7 CLUHP3-201ENST00000254109 1812 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
SVIPQ8NHG7 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 FBXW8-202ENST00000455858 4648 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 ZNF37BP-202ENST00000452075 8637 ntTSL 2 BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 CACNA2D4-223ENST00000588077 3311 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 ACAN-208ENST00000561243 7593 ntAPPRIS P2 TSL 5 BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 VANGL1-203ENST00000369509 2062 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 GOLGA6B-201ENST00000421285 2134 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 CREM-208ENST00000361599 2170 ntTSL 5 BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 TP53I11-220ENST00000533940 3703 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 GLYR1-201ENST00000321919 3772 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 SFI1-203ENST00000400288 4002 ntAPPRIS P4 TSL 2 BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 WDR93-201ENST00000268130 2409 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 FHL1-201ENST00000345434 2458 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 SLC4A1AP-206ENST00000618046 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 AC013643.3-201ENST00000623825 2596 ntBASIC8.93□□□□□ -0.98
SVIPQ8NHG7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 RHBDL3-201ENST00000269051 4661 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 ACAD10-220ENST00000549590 2888 ntTSL 5 BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 IL21R-201ENST00000337929 4849 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 TRHDE-201ENST00000261180 10733 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 PCNX2-203ENST00000344698 5348 ntAPPRIS ALT2 TSL 2 BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 CD34-201ENST00000310833 8246 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 CALCR-201ENST00000359558 3696 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 MIR4435-2HG-205ENST00000431385 843 ntTSL 3 BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 AC010531.3-201ENST00000569147 513 ntTSL 4 BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 TEX101-201ENST00000598265 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 USP4-203ENST00000415188 1454 ntTSL 3 BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 MON2-214ENST00000641654 10382 ntBASIC8.93□□□□□ -0.98
SVIPQ8NHG7 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 PHGDH-209ENST00000641074 1780 ntBASIC8.93□□□□□ -0.98
SVIPQ8NHG7 QRICH2-201ENST00000262765 5357 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 STARD13-201ENST00000255486 5798 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 STARD13-204ENST00000399365 5784 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 ANO3-201ENST00000256737 6642 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms