RNA–Protein interactions for RNA: ENST00000218867.3

SGCG-201, Transcript of sarcoglycan gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCG, Length 1,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCG-201ENST00000218867 NISCHQ9Y2I1 1504 aa24.89■■□□□ 1.57
SGCG-201ENST00000218867 CCDC180Q9P1Z9 1646 aa21.95■■□□□ 1.1
SGCG-201ENST00000218867 ABCC9O60706 1549 aa21.3■■□□□ 1
SGCG-201ENST00000218867 DCAF8L2P0C7V8 631 aa20.96■□□□□ 0.95
SGCG-201ENST00000218867 ZCCHC6Q5VYS8 1495 aaKnown RBP20.75■□□□□ 0.91
SGCG-201ENST00000218867 NACADO15069 1562 aa20.7■□□□□ 0.9
SGCG-201ENST00000218867 MYO15BQ96JP2 1530 aa20.66■□□□□ 0.9
SGCG-201ENST00000218867 RB1CC1Q8TDY2 1594 aa20.66■□□□□ 0.9
SGCG-201ENST00000218867 DCAF1Q9Y4B6 1507 aa20.64■□□□□ 0.9
SGCG-201ENST00000218867 SCRIBQ14160 1630 aa20.04■□□□□ 0.8
SGCG-201ENST00000218867 PABPN1Q86U42 306 aaKnown RBP eCLIP20.02■□□□□ 0.8
SGCG-201ENST00000218867 SHROOM4Q9ULL8 1493 aa19.89■□□□□ 0.77
SGCG-201ENST00000218867 UNC13AQ9UPW8 1703 aa19.86■□□□□ 0.77
SGCG-201ENST00000218867 BICRAQ9NZM4 1560 aa19.82■□□□□ 0.76
SGCG-201ENST00000218867 EIF4G1Q04637 1599 aaKnown RBP19.39■□□□□ 0.69
SGCG-201ENST00000218867 BAZ1AQ9NRL2 1556 aaPredicted RBP19.33■□□□□ 0.68
SGCG-201ENST00000218867 CECR2Q9BXF3 1484 aa19.29■□□□□ 0.68
SGCG-201ENST00000218867 DNAJC5BQ9UF47 199 aa19.26■□□□□ 0.67
SGCG-201ENST00000218867 CC2D2AQ9P2K1 1620 aa19.22■□□□□ 0.67
SGCG-201ENST00000218867 SMARCA4P51532 1647 aa19.2■□□□□ 0.66
SGCG-201ENST00000218867 SMARCA2P51531 1590 aa19.16■□□□□ 0.66
SGCG-201ENST00000218867 MROH2BQ7Z745 1585 aa19.12■□□□□ 0.65
SGCG-201ENST00000218867 ATAD2BQ9ULI0 1458 aa19.11■□□□□ 0.65
SGCG-201ENST00000218867 NCAPD3P42695 1498 aa19.11■□□□□ 0.65
SGCG-201ENST00000218867 RSF1Q96T23 1441 aaPredicted RBP19.08■□□□□ 0.65
SGCG-201ENST00000218867 BAZ1BQ9UIG0 1483 aaKnown RBP19.02■□□□□ 0.64
SGCG-201ENST00000218867 PEG3Q9GZU2 1588 aa19.02■□□□□ 0.64
SGCG-201ENST00000218867 HMGXB3Q12766 1538 aa18.98■□□□□ 0.63
SGCG-201ENST00000218867 SUPT5HO00267 1087 aaKnown RBP18.94■□□□□ 0.62
SGCG-201ENST00000218867 WIZO95785 1651 aa18.87■□□□□ 0.61
SGCG-201ENST00000218867 TOP2AP11388 1531 aaKnown RBP18.79■□□□□ 0.6
SGCG-201ENST00000218867 CADPSQ9ULU8 1353 aa18.62■□□□□ 0.57
SGCG-201ENST00000218867 CCDC88BA6NC98 1476 aa18.59■□□□□ 0.57
SGCG-201ENST00000218867 PDS5BQ9NTI5 1447 aa18.54■□□□□ 0.56
SGCG-201ENST00000218867 LAMC3Q9Y6N6 1575 aa18.53■□□□□ 0.56
SGCG-201ENST00000218867 CFTRP13569 1480 aa18.49■□□□□ 0.55
SGCG-201ENST00000218867 ERCC6Q03468 1493 aa18.48■□□□□ 0.55
SGCG-201ENST00000218867 NESP48681 1621 aa18.43■□□□□ 0.54
SGCG-201ENST00000218867 FANCD2Q9BXW9 1451 aa18.34■□□□□ 0.53
SGCG-201ENST00000218867 CEP164Q9UPV0 1460 aa18.31■□□□□ 0.52
SGCG-201ENST00000218867 ABCC8Q09428 1581 aa18.22■□□□□ 0.51
SGCG-201ENST00000218867 MRC2Q9UBG0 1479 aa18.22■□□□□ 0.51
SGCG-201ENST00000218867 PRDM2Q13029 1718 aa18.17■□□□□ 0.5
SGCG-201ENST00000218867 CUX2O14529 1486 aa18.14■□□□□ 0.49
SGCG-201ENST00000218867 KIF21AQ7Z4S6 1674 aa18.14■□□□□ 0.49
SGCG-201ENST00000218867 WDR62O43379 1518 aa18.07■□□□□ 0.48
SGCG-201ENST00000218867 WRNQ14191 1432 aaPredicted RBP eCLIP18.06■□□□□ 0.48
SGCG-201ENST00000218867 URB2Q14146 1524 aaKnown RBP18.04■□□□□ 0.48
SGCG-201ENST00000218867 THOC2Q8NI27 1593 aaKnown RBP18.04■□□□□ 0.48
SGCG-201ENST00000218867 DNMBPQ6XZF7 1577 aa18.03■□□□□ 0.48
SGCG-201ENST00000218867 TOPBP1Q92547 1522 aa18.03■□□□□ 0.48
SGCG-201ENST00000218867 TRIM41Q8WV44 630 aa17.97■□□□□ 0.47
SGCG-201ENST00000218867 IFT140Q96RY7 1462 aa17.95■□□□□ 0.46
SGCG-201ENST00000218867 SOGA1O94964 1423 aa17.94■□□□□ 0.46
SGCG-201ENST00000218867 CUX1P39880 1505 aa17.92■□□□□ 0.46
SGCG-201ENST00000218867 POLA1P09884 1462 aaPredicted RBP17.88■□□□□ 0.45
SGCG-201ENST00000218867 FGD5Q6ZNL6 1462 aa17.88■□□□□ 0.45
SGCG-201ENST00000218867 TOP2BQ02880 1626 aa17.87■□□□□ 0.45
SGCG-201ENST00000218867 BIVM-ERCC5R4GMW8 1640 aa17.81■□□□□ 0.44
SGCG-201ENST00000218867 SYNJ1O43426 1573 aa17.8■□□□□ 0.44
SGCG-201ENST00000218867 RAD54L2Q9Y4B4 1467 aa17.8■□□□□ 0.44
SGCG-201ENST00000218867 CHIC1Q5VXU3 224 aa17.77■□□□□ 0.44
SGCG-201ENST00000218867 TDRD9Q8NDG6 1382 aaKnown RBP17.77■□□□□ 0.43
SGCG-201ENST00000218867 ABCA10Q8WWZ4 1543 aa17.76■□□□□ 0.43
SGCG-201ENST00000218867 WDR97A6NE52 1622 aa17.74■□□□□ 0.43
SGCG-201ENST00000218867 KIF27Q86VH2 1401 aa17.73■□□□□ 0.43
SGCG-201ENST00000218867 TARBP1Q13395 1621 aaKnown RBP17.71■□□□□ 0.43
SGCG-201ENST00000218867 AQRO60306 1485 aaKnown RBP eCLIP17.71■□□□□ 0.43
SGCG-201ENST00000218867 GAPVD1Q14C86 1478 aa17.7■□□□□ 0.42
SGCG-201ENST00000218867 ZNF608Q9ULD9 1512 aaPredicted RBP17.7■□□□□ 0.42
SGCG-201ENST00000218867 GRIN2BQ13224 1484 aa17.68■□□□□ 0.42
SGCG-201ENST00000218867 CHMP7Q8WUX9 453 aaPredicted RBP17.65■□□□□ 0.42
SGCG-201ENST00000218867 FBLN2P98095 1184 aa17.64■□□□□ 0.41
SGCG-201ENST00000218867 EIF4G3O43432 1585 aaKnown RBP17.61■□□□□ 0.41
SGCG-201ENST00000218867 MAGI1Q96QZ7 1491 aaPredicted RBP17.59■□□□□ 0.41
SGCG-201ENST00000218867 EEA1Q15075 1411 aa17.59■□□□□ 0.41
SGCG-201ENST00000218867 OSCARQ8IYS5 282 aa17.59■□□□□ 0.41
SGCG-201ENST00000218867 ERICH3Q5RHP9 1530 aa17.57■□□□□ 0.4
SGCG-201ENST00000218867 IGF1RP08069 1367 aa17.55■□□□□ 0.4
SGCG-201ENST00000218867 CSRNP3Q8WYN3 585 aa17.54■□□□□ 0.4
SGCG-201ENST00000218867 ABCA5Q8WWZ7 1642 aa17.54■□□□□ 0.4
SGCG-201ENST00000218867 SNAPC4Q5SXM2 1469 aa17.54■□□□□ 0.4
SGCG-201ENST00000218867 FHAD1B1AJZ9 1412 aa17.54■□□□□ 0.4
SGCG-201ENST00000218867 SYNJ2O15056 1496 aa17.51■□□□□ 0.39
SGCG-201ENST00000218867 CARMIL1Q5VZK9 1371 aa17.5■□□□□ 0.39
SGCG-201ENST00000218867 FAM9AQ8IZU1 332 aaPredicted RBP17.49■□□□□ 0.39
SGCG-201ENST00000218867 PBRM1Q86U86 1689 aa17.45■□□□□ 0.38
SGCG-201ENST00000218867 CUL7Q14999 1698 aa17.42■□□□□ 0.38
SGCG-201ENST00000218867 RUSC2Q8N2Y8 1516 aa17.4■□□□□ 0.38
SGCG-201ENST00000218867 RAPGEF2Q9Y4G8 1499 aa17.4■□□□□ 0.38
SGCG-201ENST00000218867 ADAMTS12P58397 1594 aa17.38■□□□□ 0.37
SGCG-201ENST00000218867 GRIN2AQ12879 1464 aa17.38■□□□□ 0.37
SGCG-201ENST00000218867 DNAJC5Q9H3Z4 198 aa17.34■□□□□ 0.37
SGCG-201ENST00000218867 PRXQ9BXM0 1461 aa17.32■□□□□ 0.36
SGCG-201ENST00000218867 UBTFP17480 764 aaKnown RBP17.32■□□□□ 0.36
SGCG-201ENST00000218867 NUP160Q12769 1436 aa17.29■□□□□ 0.36
SGCG-201ENST00000218867 JPH4Q96JJ6 628 aa17.28■□□□□ 0.36
SGCG-201ENST00000218867 CHD1O14646 1710 aa17.28■□□□□ 0.36
SGCG-201ENST00000218867 KIAA0586Q9BVV6 1533 aa17.27■□□□□ 0.35
SGCG-201ENST00000218867 GOLGA3Q08378 1498 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms