RNA–Protein interactions for RNA: ENST00000344698.6

PCNX2-203, Transcript of pecanex 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PCNX2, Length 5,348 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX2-203ENST00000344698 DCAF8L2P0C7V8 631 aa20.28■□□□□ 0.84
PCNX2-203ENST00000344698 PELP1Q8IZL8 1130 aaKnown RBP19.16■□□□□ 0.66
PCNX2-203ENST00000344698 SUPT5HO00267 1087 aaKnown RBP19.1■□□□□ 0.65
PCNX2-203ENST00000344698 FAM9AQ8IZU1 332 aaPredicted RBP18.87■□□□□ 0.61
PCNX2-203ENST00000344698 APLP2Q06481 763 aa18.82■□□□□ 0.6
PCNX2-203ENST00000344698 NISCHQ9Y2I1 1504 aa18.78■□□□□ 0.6
PCNX2-203ENST00000344698 SHROOM4Q9ULL8 1493 aa18.52■□□□□ 0.56
PCNX2-203ENST00000344698 EHMT2Q96KQ7 1210 aa18.39■□□□□ 0.54
PCNX2-203ENST00000344698 CCER1Q8TC90 406 aaPredicted RBP18.3■□□□□ 0.52
PCNX2-203ENST00000344698 ERICH6Q7L0X2 663 aa18.15■□□□□ 0.5
PCNX2-203ENST00000344698 ZEB1P37275 1124 aaPredicted RBP18.11■□□□□ 0.49
PCNX2-203ENST00000344698 CENPBP07199 599 aaPredicted RBP18.1■□□□□ 0.49
PCNX2-203ENST00000344698 PCGF6Q9BYE7 350 aa17.9■□□□□ 0.46
PCNX2-203ENST00000344698 ATP1B4Q9UN42 357 aaPredicted RBP17.86■□□□□ 0.45
PCNX2-203ENST00000344698 TRIM41Q8WV44 630 aa17.86■□□□□ 0.45
PCNX2-203ENST00000344698 NEFLP07196 543 aa17.85■□□□□ 0.45
PCNX2-203ENST00000344698 MYT1Q01538 1121 aa17.84■□□□□ 0.45
PCNX2-203ENST00000344698 TTBK1Q5TCY1 1321 aaPredicted RBP17.84■□□□□ 0.45
PCNX2-203ENST00000344698 UBTFP17480 764 aaKnown RBP17.75■□□□□ 0.43
PCNX2-203ENST00000344698 RANGAP1P46060 587 aaPredicted RBP17.75■□□□□ 0.43
PCNX2-203ENST00000344698 DAXXQ9UER7 740 aaPredicted RBP17.46■□□□□ 0.39
PCNX2-203ENST00000344698 MYT1LQ9UL68 1186 aa17.41■□□□□ 0.38
PCNX2-203ENST00000344698 HRCP23327 699 aa17.39■□□□□ 0.37
PCNX2-203ENST00000344698 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.31■□□□□ 0.36
PCNX2-203ENST00000344698 HNRNPUL2Q1KMD3 747 aaKnown RBP17.31■□□□□ 0.36
PCNX2-203ENST00000344698 YTHDC1Q96MU7 727 aaKnown RBP17.29■□□□□ 0.36
PCNX2-203ENST00000344698 TRIM26Q12899 539 aaPredicted RBP17.24■□□□□ 0.35
PCNX2-203ENST00000344698 POLR3GLQ9BT43 218 aa17.16■□□□□ 0.34
PCNX2-203ENST00000344698 ITGAEP38570 1179 aa17.07■□□□□ 0.32
PCNX2-203ENST00000344698 SLC4A1APQ9BWU0 796 aaKnown RBP16.99■□□□□ 0.31
PCNX2-203ENST00000344698 ZNF316A6NFI3 1004 aaPredicted RBP16.97■□□□□ 0.31
PCNX2-203ENST00000344698 PPARGC1BQ86YN6 1023 aaKnown RBP16.97■□□□□ 0.31
PCNX2-203ENST00000344698 CLSPNQ9HAW4 1339 aa16.95■□□□□ 0.3
PCNX2-203ENST00000344698 RTL5Q5HYW3 569 aaPredicted RBP16.93■□□□□ 0.3
PCNX2-203ENST00000344698 CHIC1Q5VXU3 224 aa16.83■□□□□ 0.28
PCNX2-203ENST00000344698 ZBTB47Q9UFB7 747 aaPredicted RBP16.83■□□□□ 0.28
PCNX2-203ENST00000344698 CNGB1Q14028 1251 aaPredicted RBP16.76■□□□□ 0.27
PCNX2-203ENST00000344698 TRIM52Q96A61 297 aa16.76■□□□□ 0.27
PCNX2-203ENST00000344698 FAM50AQ14320 339 aaKnown RBP16.74■□□□□ 0.27
PCNX2-203ENST00000344698 NEFMP07197 916 aa16.68■□□□□ 0.26
PCNX2-203ENST00000344698 LOC105371045A0A1W2PR82 267 aa16.66■□□□□ 0.26
PCNX2-203ENST00000344698 DIEXFQ68CQ4 756 aaKnown RBP16.63■□□□□ 0.25
PCNX2-203ENST00000344698 ANP32CO43423 234 aa16.61■□□□□ 0.25
PCNX2-203ENST00000344698 CANXP27824 592 aaKnown RBP16.53■□□□□ 0.24
PCNX2-203ENST00000344698 CDK11AQ9UQ88 783 aaPredicted RBP16.53■□□□□ 0.24
PCNX2-203ENST00000344698 NEUROD1Q13562 356 aa16.51■□□□□ 0.23
PCNX2-203ENST00000344698 GTF3C3Q9Y5Q9 886 aa16.5■□□□□ 0.23
PCNX2-203ENST00000344698 ZNF326Q5BKZ1 582 aaKnown RBP16.48■□□□□ 0.23
PCNX2-203ENST00000344698 BCANQ96GW7 911 aa16.45■□□□□ 0.22
PCNX2-203ENST00000344698 SLC24A1O60721 1099 aa16.44■□□□□ 0.22
PCNX2-203ENST00000344698 FBLN2P98095 1184 aa16.43■□□□□ 0.22
PCNX2-203ENST00000344698 ESF1Q9H501 851 aaKnown RBP16.4■□□□□ 0.22
PCNX2-203ENST00000344698 ACIN1Q9UKV3 1341 aaKnown RBP16.38■□□□□ 0.21
PCNX2-203ENST00000344698 PABPN1Q86U42 306 aaKnown RBP eCLIP16.35■□□□□ 0.21
PCNX2-203ENST00000344698 ABCC9O60706 1549 aa16.32■□□□□ 0.2
PCNX2-203ENST00000344698 ANP32AP39687 249 aaKnown RBP16.31■□□□□ 0.2
PCNX2-203ENST00000344698 ANP32BQ92688 251 aaKnown RBP16.3■□□□□ 0.2
PCNX2-203ENST00000344698 NPM1P06748 294 aaKnown RBP eCLIP16.23■□□□□ 0.19
PCNX2-203ENST00000344698 STAG3Q9UJ98 1225 aa16.22■□□□□ 0.19
PCNX2-203ENST00000344698 UPF2Q9HAU5 1272 aaKnown RBP16.22■□□□□ 0.19
PCNX2-203ENST00000344698 CSRNP3Q8WYN3 585 aa16.19■□□□□ 0.18
PCNX2-203ENST00000344698 ZNF777Q9ULD5 760 aaPredicted RBP16.19■□□□□ 0.18
PCNX2-203ENST00000344698 HSP90AA1P07900 732 aaKnown RBP16.16■□□□□ 0.18
PCNX2-203ENST00000344698 BCL11AQ9H165 835 aa16.16■□□□□ 0.18
PCNX2-203ENST00000344698 TONSLQ96HA7 1378 aa16.12■□□□□ 0.17
PCNX2-203ENST00000344698 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.11■□□□□ 0.17
PCNX2-203ENST00000344698 DCAF1Q9Y4B6 1507 aa16.11■□□□□ 0.17
PCNX2-203ENST00000344698 P3H3Q8IVL6 736 aa16.09■□□□□ 0.17
PCNX2-203ENST00000344698 CHGAP10645 457 aaKnown RBP16.08■□□□□ 0.17
PCNX2-203ENST00000344698 ARID3CA6NKF2 412 aa16.03■□□□□ 0.16
PCNX2-203ENST00000344698 SCAF1Q9H7N4 1312 aaKnown RBP15.99■□□□□ 0.15
PCNX2-203ENST00000344698 NPM2Q86SE8 214 aaKnown RBP15.99■□□□□ 0.15
PCNX2-203ENST00000344698 TSPY4P0CV99 314 aa15.97■□□□□ 0.15
PCNX2-203ENST00000344698 TSPY10P0CW01 314 aa15.97■□□□□ 0.15
PCNX2-203ENST00000344698 CDK11BP21127 795 aaKnown RBP15.97■□□□□ 0.15
PCNX2-203ENST00000344698 WDR43Q15061 677 aaKnown RBP eCLIP15.96■□□□□ 0.15
PCNX2-203ENST00000344698 MYH16Q9H6N6 1097 aa15.94■□□□□ 0.14
PCNX2-203ENST00000344698 GLIPR1L2Q4G1C9 344 aa15.93■□□□□ 0.14
PCNX2-203ENST00000344698 TMC1Q8TDI8 760 aa15.93■□□□□ 0.14
PCNX2-203ENST00000344698 HNRNPUQ00839 825 aaKnown RBP eCLIP15.91■□□□□ 0.14
PCNX2-203ENST00000344698 EIF5BO60841 1220 aaKnown RBP15.89■□□□□ 0.13
PCNX2-203ENST00000344698 CCDC136Q96JN2 1154 aa15.86■□□□□ 0.13
PCNX2-203ENST00000344698 FKBP8Q14318 412 aa15.86■□□□□ 0.13
PCNX2-203ENST00000344698 FAM9BQ8IZU0 186 aa15.84■□□□□ 0.13
PCNX2-203ENST00000344698 ANP32EQ9BTT0 268 aa15.83■□□□□ 0.13
PCNX2-203ENST00000344698 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.83■□□□□ 0.12
PCNX2-203ENST00000344698 MTUS2Q5JR59 1369 aa15.8■□□□□ 0.12
PCNX2-203ENST00000344698 PLPPR3Q6T4P5 718 aa15.8■□□□□ 0.12
PCNX2-203ENST00000344698 NCLP19338 710 aaKnown RBP15.79■□□□□ 0.12
PCNX2-203ENST00000344698 DDX10Q13206 875 aaKnown RBP15.77■□□□□ 0.12
PCNX2-203ENST00000344698 CDCA8Q53HL2 280 aa15.77■□□□□ 0.12
PCNX2-203ENST00000344698 CHMP7Q8WUX9 453 aaPredicted RBP15.76■□□□□ 0.11
PCNX2-203ENST00000344698 PPP1R15AO75807 674 aaPredicted RBP15.76■□□□□ 0.11
PCNX2-203ENST00000344698 MRS2Q9HD23 443 aa15.76■□□□□ 0.11
PCNX2-203ENST00000344698 BECN1Q14457 450 aa15.75■□□□□ 0.11
PCNX2-203ENST00000344698 SCRIBQ14160 1630 aa15.75■□□□□ 0.11
PCNX2-203ENST00000344698 CFAP53Q96M91 514 aa15.74■□□□□ 0.11
PCNX2-203ENST00000344698 DDRGK1Q96HY6 314 aa15.74■□□□□ 0.11
PCNX2-203ENST00000344698 RSF1Q96T23 1441 aaPredicted RBP15.73■□□□□ 0.11
PCNX2-203ENST00000344698 GOLGA6L22H0YM25 854 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms