RNA–Protein interactions for RNA: ENST00000417550.6

ZNF250-202, Transcript of zinc finger protein 250, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF250, Length 2,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF250-202ENST00000417550 NISCHQ9Y2I1 1504 aa24.36■■□□□ 1.49
ZNF250-202ENST00000417550 CCDC180Q9P1Z9 1646 aa20.97■□□□□ 0.95
ZNF250-202ENST00000417550 ZCCHC6Q5VYS8 1495 aaKnown RBP20.59■□□□□ 0.89
ZNF250-202ENST00000417550 SHROOM4Q9ULL8 1493 aa20.33■□□□□ 0.84
ZNF250-202ENST00000417550 DCAF1Q9Y4B6 1507 aa20.07■□□□□ 0.8
ZNF250-202ENST00000417550 DCAF8L2P0C7V8 631 aa19.96■□□□□ 0.79
ZNF250-202ENST00000417550 SUPT5HO00267 1087 aaKnown RBP19.73■□□□□ 0.75
ZNF250-202ENST00000417550 MYO15BQ96JP2 1530 aa19.63■□□□□ 0.73
ZNF250-202ENST00000417550 ABCC9O60706 1549 aa19.5■□□□□ 0.71
ZNF250-202ENST00000417550 SCRIBQ14160 1630 aa19.48■□□□□ 0.71
ZNF250-202ENST00000417550 NACADO15069 1562 aa19.39■□□□□ 0.7
ZNF250-202ENST00000417550 RB1CC1Q8TDY2 1594 aa19.13■□□□□ 0.65
ZNF250-202ENST00000417550 CHIC1Q5VXU3 224 aa19.12■□□□□ 0.65
ZNF250-202ENST00000417550 RSF1Q96T23 1441 aaPredicted RBP19.11■□□□□ 0.65
ZNF250-202ENST00000417550 CECR2Q9BXF3 1484 aa18.97■□□□□ 0.63
ZNF250-202ENST00000417550 UNC13AQ9UPW8 1703 aa18.92■□□□□ 0.62
ZNF250-202ENST00000417550 MROH2BQ7Z745 1585 aa18.9■□□□□ 0.62
ZNF250-202ENST00000417550 WIZO95785 1651 aa18.79■□□□□ 0.6
ZNF250-202ENST00000417550 BAZ1AQ9NRL2 1556 aaPredicted RBP18.73■□□□□ 0.59
ZNF250-202ENST00000417550 BICRAQ9NZM4 1560 aa18.67■□□□□ 0.58
ZNF250-202ENST00000417550 SMARCA4P51532 1647 aa18.65■□□□□ 0.58
ZNF250-202ENST00000417550 TOP2AP11388 1531 aaKnown RBP18.53■□□□□ 0.56
ZNF250-202ENST00000417550 EIF4G1Q04637 1599 aaKnown RBP18.53■□□□□ 0.56
ZNF250-202ENST00000417550 PABPN1Q86U42 306 aaKnown RBP eCLIP18.5■□□□□ 0.55
ZNF250-202ENST00000417550 LOC105371045A0A1W2PR82 267 aa18.47■□□□□ 0.55
ZNF250-202ENST00000417550 TRIM41Q8WV44 630 aa18.43■□□□□ 0.54
ZNF250-202ENST00000417550 SMARCA2P51531 1590 aa18.42■□□□□ 0.54
ZNF250-202ENST00000417550 CCDC88BA6NC98 1476 aa18.38■□□□□ 0.53
ZNF250-202ENST00000417550 PEG3Q9GZU2 1588 aa18.36■□□□□ 0.53
ZNF250-202ENST00000417550 ABCC8Q09428 1581 aa18.22■□□□□ 0.51
ZNF250-202ENST00000417550 FAM9AQ8IZU1 332 aaPredicted RBP18.21■□□□□ 0.51
ZNF250-202ENST00000417550 ATAD2BQ9ULI0 1458 aa18.2■□□□□ 0.5
ZNF250-202ENST00000417550 BAZ1BQ9UIG0 1483 aaKnown RBP18.11■□□□□ 0.49
ZNF250-202ENST00000417550 PCGF6Q9BYE7 350 aa18.1■□□□□ 0.49
ZNF250-202ENST00000417550 EHMT2Q96KQ7 1210 aa18.01■□□□□ 0.47
ZNF250-202ENST00000417550 HMGXB3Q12766 1538 aa17.95■□□□□ 0.46
ZNF250-202ENST00000417550 SOGA1O94964 1423 aa17.95■□□□□ 0.46
ZNF250-202ENST00000417550 HRCP23327 699 aa17.95■□□□□ 0.46
ZNF250-202ENST00000417550 WRNQ14191 1432 aaPredicted RBP eCLIP17.94■□□□□ 0.46
ZNF250-202ENST00000417550 SYNJ1O43426 1573 aa17.93■□□□□ 0.46
ZNF250-202ENST00000417550 NCAPD3P42695 1498 aa17.92■□□□□ 0.46
ZNF250-202ENST00000417550 RUSC2Q8N2Y8 1516 aa17.89■□□□□ 0.45
ZNF250-202ENST00000417550 TRIM26Q12899 539 aaPredicted RBP17.88■□□□□ 0.45
ZNF250-202ENST00000417550 EEA1Q15075 1411 aa17.84■□□□□ 0.45
ZNF250-202ENST00000417550 TOP2BQ02880 1626 aa17.76■□□□□ 0.43
ZNF250-202ENST00000417550 CSRNP3Q8WYN3 585 aa17.75■□□□□ 0.43
ZNF250-202ENST00000417550 BIVM-ERCC5R4GMW8 1640 aa17.73■□□□□ 0.43
ZNF250-202ENST00000417550 CEP162Q5TB80 1403 aa17.73■□□□□ 0.43
ZNF250-202ENST00000417550 TNIKQ9UKE5 1360 aa17.72■□□□□ 0.43
ZNF250-202ENST00000417550 GOLGA3Q08378 1498 aa17.7■□□□□ 0.42
ZNF250-202ENST00000417550 KIF21BO75037 1637 aa17.69■□□□□ 0.42
ZNF250-202ENST00000417550 CFTRP13569 1480 aa17.69■□□□□ 0.42
ZNF250-202ENST00000417550 DNAJC5BQ9UF47 199 aa17.65■□□□□ 0.42
ZNF250-202ENST00000417550 PRDM2Q13029 1718 aa17.65■□□□□ 0.42
ZNF250-202ENST00000417550 CC2D2AQ9P2K1 1620 aa17.64■□□□□ 0.42
ZNF250-202ENST00000417550 CUX1P39880 1505 aa17.64■□□□□ 0.41
ZNF250-202ENST00000417550 CEP164Q9UPV0 1460 aa17.64■□□□□ 0.41
ZNF250-202ENST00000417550 PPARGC1BQ86YN6 1023 aaKnown RBP17.6■□□□□ 0.41
ZNF250-202ENST00000417550 UBTFP17480 764 aaKnown RBP17.57■□□□□ 0.4
ZNF250-202ENST00000417550 RAPGEF2Q9Y4G8 1499 aa17.56■□□□□ 0.4
ZNF250-202ENST00000417550 CADPSQ9ULU8 1353 aa17.5■□□□□ 0.39
ZNF250-202ENST00000417550 PRXQ9BXM0 1461 aa17.47■□□□□ 0.39
ZNF250-202ENST00000417550 ERICH3Q5RHP9 1530 aa17.45■□□□□ 0.38
ZNF250-202ENST00000417550 CLIP1P30622 1438 aa17.45■□□□□ 0.38
ZNF250-202ENST00000417550 KIF27Q86VH2 1401 aa17.4■□□□□ 0.38
ZNF250-202ENST00000417550 TTBK1Q5TCY1 1321 aaPredicted RBP17.37■□□□□ 0.37
ZNF250-202ENST00000417550 VPS8Q8N3P4 1428 aa17.36■□□□□ 0.37
ZNF250-202ENST00000417550 FANCD2Q9BXW9 1451 aa17.35■□□□□ 0.37
ZNF250-202ENST00000417550 FGD5Q6ZNL6 1462 aa17.34■□□□□ 0.37
ZNF250-202ENST00000417550 NESP48681 1621 aa17.32■□□□□ 0.36
ZNF250-202ENST00000417550 ZEB1P37275 1124 aaPredicted RBP17.32■□□□□ 0.36
ZNF250-202ENST00000417550 CUX2O14529 1486 aa17.31■□□□□ 0.36
ZNF250-202ENST00000417550 ARAP1Q96P48 1450 aa17.28■□□□□ 0.36
ZNF250-202ENST00000417550 DNMBPQ6XZF7 1577 aa17.27■□□□□ 0.35
ZNF250-202ENST00000417550 RANGAP1P46060 587 aaPredicted RBP17.24■□□□□ 0.35
ZNF250-202ENST00000417550 IGF1RP08069 1367 aa17.24■□□□□ 0.35
ZNF250-202ENST00000417550 LAMC3Q9Y6N6 1575 aa17.23■□□□□ 0.35
ZNF250-202ENST00000417550 TOPBP1Q92547 1522 aa17.23■□□□□ 0.35
ZNF250-202ENST00000417550 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.21■□□□□ 0.35
ZNF250-202ENST00000417550 POLA1P09884 1462 aaPredicted RBP17.19■□□□□ 0.34
ZNF250-202ENST00000417550 RAD54L2Q9Y4B4 1467 aa17.17■□□□□ 0.34
ZNF250-202ENST00000417550 ARHGAP35Q9NRY4 1499 aa17.17■□□□□ 0.34
ZNF250-202ENST00000417550 ABCA10Q8WWZ4 1543 aa17.17■□□□□ 0.34
ZNF250-202ENST00000417550 PELP1Q8IZL8 1130 aaKnown RBP17.16■□□□□ 0.34
ZNF250-202ENST00000417550 URB2Q14146 1524 aaKnown RBP17.15■□□□□ 0.34
ZNF250-202ENST00000417550 CARMIL1Q5VZK9 1371 aa17.14■□□□□ 0.33
ZNF250-202ENST00000417550 WDR97A6NE52 1622 aa17.13■□□□□ 0.33
ZNF250-202ENST00000417550 CCER1Q8TC90 406 aaPredicted RBP17.11■□□□□ 0.33
ZNF250-202ENST00000417550 KIF21AQ7Z4S6 1674 aa17.1■□□□□ 0.33
ZNF250-202ENST00000417550 APLP2Q06481 763 aa17.08■□□□□ 0.32
ZNF250-202ENST00000417550 PDS5BQ9NTI5 1447 aa17.04■□□□□ 0.32
ZNF250-202ENST00000417550 CUL7Q14999 1698 aa17.04■□□□□ 0.32
ZNF250-202ENST00000417550 ABCA5Q8WWZ7 1642 aa17.03■□□□□ 0.32
ZNF250-202ENST00000417550 KANK4Q5T7N3 995 aaPredicted RBP17.02■□□□□ 0.32
ZNF250-202ENST00000417550 HNRNPUL2Q1KMD3 747 aaKnown RBP16.99■□□□□ 0.31
ZNF250-202ENST00000417550 CTTNBP2Q8WZ74 1663 aa16.98■□□□□ 0.31
ZNF250-202ENST00000417550 TARBP1Q13395 1621 aaKnown RBP16.96■□□□□ 0.31
ZNF250-202ENST00000417550 TIAM1Q13009 1591 aa16.95■□□□□ 0.3
ZNF250-202ENST00000417550 TDRD9Q8NDG6 1382 aaKnown RBP16.94■□□□□ 0.3
ZNF250-202ENST00000417550 RRBP1Q9P2E9 1410 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms