RNA–Protein interactions for RNA: ENST00000401530.5

VIT-204, Transcript of vitrin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VIT, Length 2,161 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIT-204ENST00000401530 NISCHQ9Y2I1 1504 aa25.56■■□□□ 1.68
VIT-204ENST00000401530 CCDC180Q9P1Z9 1646 aa22.47■■□□□ 1.19
VIT-204ENST00000401530 ABCC9O60706 1549 aa21.44■■□□□ 1.02
VIT-204ENST00000401530 ZCCHC6Q5VYS8 1495 aaKnown RBP21.42■■□□□ 1.02
VIT-204ENST00000401530 DCAF1Q9Y4B6 1507 aa21.17■□□□□ 0.98
VIT-204ENST00000401530 DCAF8L2P0C7V8 631 aa21.13■□□□□ 0.97
VIT-204ENST00000401530 MYO15BQ96JP2 1530 aa21.05■□□□□ 0.96
VIT-204ENST00000401530 NACADO15069 1562 aa20.99■□□□□ 0.95
VIT-204ENST00000401530 RB1CC1Q8TDY2 1594 aa20.88■□□□□ 0.93
VIT-204ENST00000401530 SHROOM4Q9ULL8 1493 aa20.57■□□□□ 0.88
VIT-204ENST00000401530 SCRIBQ14160 1630 aa20.57■□□□□ 0.88
VIT-204ENST00000401530 UNC13AQ9UPW8 1703 aa20.39■□□□□ 0.85
VIT-204ENST00000401530 BICRAQ9NZM4 1560 aa20.21■□□□□ 0.83
VIT-204ENST00000401530 PABPN1Q86U42 306 aaKnown RBP eCLIP20.12■□□□□ 0.81
VIT-204ENST00000401530 CECR2Q9BXF3 1484 aa19.84■□□□□ 0.77
VIT-204ENST00000401530 BAZ1AQ9NRL2 1556 aaPredicted RBP19.78■□□□□ 0.76
VIT-204ENST00000401530 SMARCA4P51532 1647 aa19.72■□□□□ 0.75
VIT-204ENST00000401530 MROH2BQ7Z745 1585 aa19.71■□□□□ 0.75
VIT-204ENST00000401530 RSF1Q96T23 1441 aaPredicted RBP19.7■□□□□ 0.74
VIT-204ENST00000401530 SUPT5HO00267 1087 aaKnown RBP19.65■□□□□ 0.74
VIT-204ENST00000401530 EIF4G1Q04637 1599 aaKnown RBP19.64■□□□□ 0.73
VIT-204ENST00000401530 WIZO95785 1651 aa19.53■□□□□ 0.72
VIT-204ENST00000401530 PEG3Q9GZU2 1588 aa19.5■□□□□ 0.71
VIT-204ENST00000401530 SMARCA2P51531 1590 aa19.47■□□□□ 0.71
VIT-204ENST00000401530 ATAD2BQ9ULI0 1458 aa19.46■□□□□ 0.71
VIT-204ENST00000401530 CC2D2AQ9P2K1 1620 aa19.41■□□□□ 0.7
VIT-204ENST00000401530 TOP2AP11388 1531 aaKnown RBP19.37■□□□□ 0.69
VIT-204ENST00000401530 NCAPD3P42695 1498 aa19.35■□□□□ 0.69
VIT-204ENST00000401530 BAZ1BQ9UIG0 1483 aaKnown RBP19.34■□□□□ 0.69
VIT-204ENST00000401530 HMGXB3Q12766 1538 aa19.32■□□□□ 0.68
VIT-204ENST00000401530 CCDC88BA6NC98 1476 aa19.13■□□□□ 0.65
VIT-204ENST00000401530 DNAJC5BQ9UF47 199 aa19.11■□□□□ 0.65
VIT-204ENST00000401530 CFTRP13569 1480 aa18.83■□□□□ 0.61
VIT-204ENST00000401530 CADPSQ9ULU8 1353 aa18.82■□□□□ 0.6
VIT-204ENST00000401530 LAMC3Q9Y6N6 1575 aa18.76■□□□□ 0.59
VIT-204ENST00000401530 PRDM2Q13029 1718 aa18.74■□□□□ 0.59
VIT-204ENST00000401530 NESP48681 1621 aa18.72■□□□□ 0.59
VIT-204ENST00000401530 CHIC1Q5VXU3 224 aa18.67■□□□□ 0.58
VIT-204ENST00000401530 FANCD2Q9BXW9 1451 aa18.62■□□□□ 0.57
VIT-204ENST00000401530 PDS5BQ9NTI5 1447 aa18.61■□□□□ 0.57
VIT-204ENST00000401530 ABCC8Q09428 1581 aa18.61■□□□□ 0.57
VIT-204ENST00000401530 WRNQ14191 1432 aaPredicted RBP eCLIP18.57■□□□□ 0.56
VIT-204ENST00000401530 CEP164Q9UPV0 1460 aa18.55■□□□□ 0.56
VIT-204ENST00000401530 TRIM41Q8WV44 630 aa18.53■□□□□ 0.56
VIT-204ENST00000401530 KIF21AQ7Z4S6 1674 aa18.51■□□□□ 0.55
VIT-204ENST00000401530 SYNJ1O43426 1573 aa18.49■□□□□ 0.55
VIT-204ENST00000401530 CUX1P39880 1505 aa18.47■□□□□ 0.55
VIT-204ENST00000401530 TOP2BQ02880 1626 aa18.46■□□□□ 0.55
VIT-204ENST00000401530 BIVM-ERCC5R4GMW8 1640 aa18.45■□□□□ 0.54
VIT-204ENST00000401530 ERCC6Q03468 1493 aa18.44■□□□□ 0.54
VIT-204ENST00000401530 DNMBPQ6XZF7 1577 aa18.42■□□□□ 0.54
VIT-204ENST00000401530 MRC2Q9UBG0 1479 aa18.4■□□□□ 0.54
VIT-204ENST00000401530 URB2Q14146 1524 aaKnown RBP18.39■□□□□ 0.54
VIT-204ENST00000401530 TOPBP1Q92547 1522 aa18.38■□□□□ 0.53
VIT-204ENST00000401530 FGD5Q6ZNL6 1462 aa18.31■□□□□ 0.52
VIT-204ENST00000401530 WDR62O43379 1518 aa18.31■□□□□ 0.52
VIT-204ENST00000401530 THOC2Q8NI27 1593 aaKnown RBP18.31■□□□□ 0.52
VIT-204ENST00000401530 POLA1P09884 1462 aaPredicted RBP18.27■□□□□ 0.51
VIT-204ENST00000401530 SOGA1O94964 1423 aa18.2■□□□□ 0.5
VIT-204ENST00000401530 EEA1Q15075 1411 aa18.18■□□□□ 0.5
VIT-204ENST00000401530 RAD54L2Q9Y4B4 1467 aa18.18■□□□□ 0.5
VIT-204ENST00000401530 ABCA10Q8WWZ4 1543 aa18.16■□□□□ 0.5
VIT-204ENST00000401530 CUX2O14529 1486 aa18.15■□□□□ 0.5
VIT-204ENST00000401530 FAM9AQ8IZU1 332 aaPredicted RBP18.14■□□□□ 0.49
VIT-204ENST00000401530 KIF27Q86VH2 1401 aa18.14■□□□□ 0.49
VIT-204ENST00000401530 RUSC2Q8N2Y8 1516 aa18.13■□□□□ 0.49
VIT-204ENST00000401530 TARBP1Q13395 1621 aaKnown RBP18.13■□□□□ 0.49
VIT-204ENST00000401530 IFT140Q96RY7 1462 aa18.13■□□□□ 0.49
VIT-204ENST00000401530 WDR97A6NE52 1622 aa18.13■□□□□ 0.49
VIT-204ENST00000401530 CSRNP3Q8WYN3 585 aa18.05■□□□□ 0.48
VIT-204ENST00000401530 ABCA5Q8WWZ7 1642 aa18.04■□□□□ 0.48
VIT-204ENST00000401530 TDRD9Q8NDG6 1382 aaKnown RBP18.02■□□□□ 0.48
VIT-204ENST00000401530 GAPVD1Q14C86 1478 aa18■□□□□ 0.47
VIT-204ENST00000401530 ZNF608Q9ULD9 1512 aaPredicted RBP17.99■□□□□ 0.47
VIT-204ENST00000401530 IGF1RP08069 1367 aa17.97■□□□□ 0.47
VIT-204ENST00000401530 AQRO60306 1485 aaKnown RBP eCLIP17.96■□□□□ 0.47
VIT-204ENST00000401530 EIF4G3O43432 1585 aaKnown RBP17.96■□□□□ 0.47
VIT-204ENST00000401530 ERICH3Q5RHP9 1530 aa17.95■□□□□ 0.46
VIT-204ENST00000401530 KIF21BO75037 1637 aa17.95■□□□□ 0.46
VIT-204ENST00000401530 PBRM1Q86U86 1689 aa17.93■□□□□ 0.46
VIT-204ENST00000401530 GRIN2BQ13224 1484 aa17.93■□□□□ 0.46
VIT-204ENST00000401530 PRXQ9BXM0 1461 aa17.92■□□□□ 0.46
VIT-204ENST00000401530 CUL7Q14999 1698 aa17.91■□□□□ 0.46
VIT-204ENST00000401530 LOC105371045A0A1W2PR82 267 aa17.9■□□□□ 0.46
VIT-204ENST00000401530 GOLGA3Q08378 1498 aa17.9■□□□□ 0.46
VIT-204ENST00000401530 CARMIL1Q5VZK9 1371 aa17.89■□□□□ 0.45
VIT-204ENST00000401530 EHMT2Q96KQ7 1210 aa17.86■□□□□ 0.45
VIT-204ENST00000401530 RAPGEF2Q9Y4G8 1499 aa17.86■□□□□ 0.45
VIT-204ENST00000401530 ADAMTS12P58397 1594 aa17.83■□□□□ 0.45
VIT-204ENST00000401530 SNAPC4Q5SXM2 1469 aa17.83■□□□□ 0.44
VIT-204ENST00000401530 FHAD1B1AJZ9 1412 aa17.82■□□□□ 0.44
VIT-204ENST00000401530 MAGI1Q96QZ7 1491 aaPredicted RBP17.82■□□□□ 0.44
VIT-204ENST00000401530 UBTFP17480 764 aaKnown RBP17.79■□□□□ 0.44
VIT-204ENST00000401530 TNIKQ9UKE5 1360 aa17.77■□□□□ 0.44
VIT-204ENST00000401530 SYNJ2O15056 1496 aa17.74■□□□□ 0.43
VIT-204ENST00000401530 GRIN2AQ12879 1464 aa17.69■□□□□ 0.42
VIT-204ENST00000401530 CHMP7Q8WUX9 453 aaPredicted RBP17.68■□□□□ 0.42
VIT-204ENST00000401530 CTTNBP2Q8WZ74 1663 aa17.65■□□□□ 0.42
VIT-204ENST00000401530 FBLN2P98095 1184 aa17.64■□□□□ 0.42
VIT-204ENST00000401530 CEP162Q5TB80 1403 aa17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms